Effector profile
PlantPEAD ID: PlantPEAD36842 Uniprot ID: F2W4Y9 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 36090 Pathogen type: Nematoda
Species: Globodera pallida Strain: Other name: Potato cyst nematode
Gene name: Cm-1 NCBI Gene ID: HM148921
Entry name: F2W4Y9_GLOPA Protein name: Chorismate mutase variant IRII
DOI:
Gene/Protein information
Gene sequence:
ATGAATTTGTTAGTCGTTCCGTTTTTTCTGTCGCTTTTTTTGCCATTTGCACCCGCACCAAAATCGCCCGCCCGTCGTGCTGATGCGAATCGACAAAATGATCGTATAAACTGCGAGAAGCATTGCACTAATTATTACCTAGCCGAAAACAACAAATGCAAGTCATCGGAGGAAATCATTTTGCGCAAGTCCGACTGTGCCTTCATGAAGAACATTGAGAATGGACTCAAATTTGTTGTTGGGATGGAAGGCCAAACGGAAACGGAATCCCCAACGGAAAACGCCCCAACAGCCAACAATAATAATTTTATGTGTTGTAAGCCAAATCAAGGTACGGTCACTAAACGGAAAGATGACAATTTGTGA
Protein sequence:
MNLLVVPFFLSLFLPFAPAPKSPARRADANRQNDRINCEKHCTNYYLAENNKCKSSEEIILRKSDCAFMKNIENGLKFVVGMEGQTETESPTENAPTANNNNFMCCKPNQGTVTKRKDDNL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
13663.5 121 8.23 -0.66 61.14
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.