Effector profile
PlantPEAD ID: PlantPEAD36844 Uniprot ID: F2W4Z2 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 36090 Pathogen type: Nematoda
Species: Globodera pallida Strain: Other name: Potato cyst nematode
Gene name: Cm-1 NCBI Gene ID: HM148924
Entry name: F2W4Z2_GLOPA Protein name: Chorismate mutase protein
DOI:
Gene/Protein information
Gene sequence:
ATGAATTTGTTAGTCGTTCCGTTTTTTCTGTCGCTTTTTTTGCCATTTGCACCCGCACCAAAATCGCCCGCTCGTCGTGCTGATGCGAATCGACAAAATGCTCATATAAAGTGCGAAAAGCATTGCACTAATTATTACCTAGCCGAAAACAACAAATGCAAGTCATCGGAGGAAATCATTTTGCGCAAGTCCGACTGTGCCTTCATGAAGAACATTGAGAATGGACTCAAATTTGTTGTTGGGATGGAAGGCCAAACAGAAACGGAATCCCCAACGGAAAACGCCCCAACAGCCAACAATAATAATTTTATGTGTTGTAAGCCAAATCAAGAGACGGCCACACTCTTCATTGTCGGCATGGCCAACAAACGGCTGATGTTGGCCAAAGACGTGGCTCTCTACAAGTACATCAACAACAATAGCATTGACGATTTTGAGCGTGAAAAGGTTGTGTTGCAAAATGTTTTGGCTCAGGCGAACAGTGCCGGCATAAGCGACAACTACGGGGAGCCGTTCTTCCAAGACCAAATGGACGCTAACAAAGTCATTCAGAAGGGTTACGTGAATACGTGGAACATCAAAGGGTCGTCGCCGTCTCAGACAGTGCCCGACTTGCAGACGGTCACCCGTCCCAAGGTGACGGAGGCAACAGCCGACATGGTGTTGGCACTGAAAACGTTCCAATCGTTTCGCAATGAATCGAATTGTTGGAGTTCGCTGGAACATAAACAGACAATGACCGGCAATTTTCTGAGTTTGAACGAGCCGAACGGTGTGGACGCCTTCCGAAAAGCGGTGGTCCGACTGTGTGGCCAGGAGCCGGAACAAAACACAGTGCACGCCATTGACGAACAGGCCAAGAAACTGCTGAATGA
Protein sequence:
MNLLVVPFFLSLFLPFAPAPKSPARRADANRQNAHIKCEKHCTNYYLAENNKCKSSEEIILRKSDCAFMKNIENGLKFVVGMEGQTETESPTENAPTANNNNFMCCKPNQETATLFIVGMANKRLMLAKDVALYKYINNNSIDDFEREKVVLQNVLAQANSAGISDNYGEPFFQDQMDANKVIQKGYVNTWNIKGSSPSQTVPDLQTVTRPKVTEATADMVLALKTFQSFRNESNCWSSLEHKQTMTGNFLSLNEPNGVDAFRKAVVRLCGQEPEQNTVHAIDEQAKKLLN
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
32630 291 6.89 -0.473 48.38
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.