Effector profile
| PlantPEAD ID: PlantPEAD36885 | Uniprot ID: A0A3M4VDF2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36746 | Pathogen type: Bacteria |
| Species: Pseudomonas cichorii | Strain: ICMP 6917 | Other name: |
| Gene name: | NCBI Gene ID: RBRY01000183 | |
| Entry name: A0A3M4VDF2_PSECI | Protein name: Protease II | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGTCCAGTTGCAAAACCTTGAAGATAAAACCGTACTCAAGGGCGACATCGCGCAGCCCCTGATAGCGACCGCTCATGCCGCCATGGCCGGCGCCCAGTTCGGTCTTGAGCAGCAGAAGGTTGTCGTCAGTCTTTATGTCGCGCAGTTTCGCGACCCATTTGGCAGCTTCCCAATATTGCACGCGGCTGTCGTTGTAACCGGCAATGACCAGGGTGGCGGGGTAGGCCTGGGCGCTGACATTTTCGTAAGGCGCATAGGCCTTGATACGGGCATGAACCTCTGGCTCCTGCGGATTGCCCCATTCGTCGTATTCGGTGACGGTCAGCGGCAGTTCAGGGTCGAGCATGGTGTTGAGCACGTCCACGAACGGCACTTCGGCAATCGCCGCCTTGAACAGCTCCGGACGCTGGTTGAGTACGGCACCGATCAATAATCCTCCGGCGCTGCCACCGCTGATGACCAGTTGATTGGCGCGGGTCAGGCCCTTGTCGATCAGGTGTTCGGCGCAGGCAATGAAATCACCGAAGGTGTTCTGTTTGTGTTCCTGTTTGCCGTTGCGATACCAGGCTTCACCCAGTTCACCACCGCCGCGTACATGGGCAATGGCAAAGGCTACTCCACGATCCAGCAGGCTCAGACGGGCGTGGGAAAACCATGGGTCCAGGCTTTCGCCGTACGCGCCGTAACCATAGAGATACAGTGGCGTCGCCTGGCCCAGCAACTCGCGTTTGACCACCAGACTGATGGGGACTTGTGTGCCATCGCTGGCGGTCGCCCAGAGACGCTGACTGACGTAGGCATCGGCATCGAACTCACCGAGTACCGGCGTTTCCTTGAGCACCACTTGCTCGCCGGTGGCCAGAGCCAACTGACGGACCTGCGCCGGACGATTGAGGGACTGATAGCGCAGGCGAATGCTGTCGCTGTCGAATTCCAGTGAGTCCTGTACATACAGGCTGTAGGCCGCGTCGGGCAATTGCACGCGATAGGCCGGCAGGCCTTGTGGGCGAACTTCGATGATCGGCAGGCCACCTTCGCGCAGGCTCAGGGTCAGGCTTCTGGCATTGAGGCTCATATCTTCCAGCATCACTGTATCGCTGTGCGGGACCAGCTCTTGCCAGCCATCGCGGCCCGCATGCTGTTCCGAGGCCTGATACAGCGCGAAGTTGATACCGCTCTGATTACTGCGGATAAACCAGCTCCAGGCACCATCGAGCTGGCCGTGATCCGGAAAGTATTCATGACCCTCGACTCGCTCGGCCATGCACACGAAGGCTTGCTCGGGATGCTCGGCATCCAGCAGCCAGGCTTCGCTGGTGGTCTTGCTGTTGAGCAGCAGAATCAGTTGGCGCTCGGAGCTGCTACGGAAACAGTGCAGGAAGAAACGGCCGTCCGGCTCGCTGAATACCAGGTCGGCCGAGTCGCTGCCCAGACGATGACGGTAGAGTTTGTGCGGGCGGTGAGTGTCGTCCAGTTCGCCGAAGAACAGCGTCTGGCTGTCATTGGCCCAGGTCATGCTGCCGTCGCAATCTTCAAACGGCAGGCTGCTCACCTGGCCTGTGCCCAGCTCCTTGACGTAAAGCTGATAGACCTCTTCGCCCGTGGTATCCAGGCTGTAGGCCAGGCGTTGATGGTCGGGGCTGATACTGAACGCGCCCAGAGAGAAGAATCCGCCATCGGCCAGCACGTTGGGGTCCAGCAACAGCTCTTCATGGCTCTCATCGACGGTGTTCGAGTCATCTGCCGGGCGCGGGCAGCGATAGTGTCTGGCATATTCATCACCCTCGGTGGTGCGGGTGTAATACAGGTACGGGCCCCAGGGGGAGGGCAGCGACAGGTCGGTTTCCAGAATGCGGCCTTTTATTTCCTGGAACAGGGCTTCACGCAATTGCGCCTGATCGGCCAGTTGCTGTTCCTGATAACTGTTTTCAGCCTTGAGATAGTCGAGCACTTCATCGCTGTCGCGATTCTGCAACCATGCATAGGGATCGGGGCCGTCGGCCTTGCGAGCGATCGGGGCGCTGGAGGTGGCATTCGAGAAGGACAT
Protein sequence:
MSFSNATSSAPIARKADGPDPYAWLQNRDSDEVLDYLKAENSYQEQQLADQAQLREALFQEIKGRILETDLSLPSPWGPYLYYTRTTEGDEYARHYRCPRPADDSNTVDESHEELLLDPNVLADGGFFSLGAFSISPDHQRLAYSLDTTGEEVYQLYVKELGTGQVSSLPFEDCDGSMTWANDSQTLFFGELDDTHRPHKLYRHRLGSDSADLVFSEPDGRFFLHCFRSSSERQLILLLNSKTTSEAWLLDAEHPEQAFVCMAERVEGHEYFPDHGQLDGAWSWFIRSNQSGINFALYQASEQHAGRDGWQELVPHSDTVMLEDMSLNARSLTLSLREGGLPIIEVRPQGLPAYRVQLPDAAYSLYVQDSLEFDSDSIRLRYQSLNRPAQVRQLALATGEQVVLKETPVLGEFDADAYVSQRLWATASDGTQVPISLVVKRELLGQATPLYLYGYGAYGESLDPWFSHARLSLLDRGVAFAIAHVRGGGELGEAWYRNGKQEHKQNTFGDFIACAEHLIDKGLTRANQLVISGGSAGGLLIGAVLNQRPELFKAAIAEVPFVDVLNTMLDPELPLTVTEYDEWGNPQEPEVHARIKAYAPYENVSAQAYPATLVIAGYNDSRVQYWEAAKWVAKLRDIKTDDNLLLLKTELGAGHGGMSGRYQGLRDVALEYGFIFKVLQLD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 76320.1 | 682 | 4.75 | -0.377 | 36.98 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR029058,IPR023302,IPR001375,IPR002470
Pfam: PF00326,PF02897
SMART:
KEGG:
PRINTS: PR00862