Effector profile
| PlantPEAD ID: PlantPEAD36962 | Uniprot ID: A0A370THU4 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 2656787 | Pathogen type: Fungi |
| Species: Venustampulla echinocandica | Strain: BP 5553 | Other name: |
| Gene name: | NCBI Gene ID: NPIC01000007 | |
| Entry name: A0A370THU4_9HELO | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCTCTTAGAGGTGCATGCGTCAAGATTCTACCTAGCGAGCAACTTAGCACTCCTTGCGAGAGCTCCTGTATAGCTGCTCTGCAAAAACTTCGGACGTCTATCTCGGGAGCATGCACAAAGTCTTTAGACGTGATGGTTCTAAACTCTGTCGCTTATCCACCGACATTTTTGGCTGATCGCTATCTGCACACCTCGAGTCTTTCATGTCTCAAAGATAACTATACAGACACCTCTTACTGTGTAAAAGCAGTGGGCAGTATCGCATCTTACCCTGGATATAAAACCTCCACGTTAGTAACAACTTTTGCTTGCCCTGCAACCGCGACCGTCTTTGTTCCCAGTCCCGTGGCGACGGCTACTTTGAATCCGACTACTTCTGGTACTACTATCAACTACTATCTCTACGAGAATACCTTTGATGCTACTTTAAGATCAACAGATCTGGCCGTAGCAAATTCATACGATGACTGGGCGCAATATACTGATGTTACTTTCCAAGAATTGATAGAGTGGAACCCGAGTCTGCAATTGGGGTATTACGTGCTGCAATTTGGGAATAGTTATTATATCCAAAAGTGGTAG
Protein sequence:
MALRGACVKILPSEQLSTPCESSCIAALQKLRTSISGACTKSLDVMVLNSVAYPPTFLADRYLHTSSLSCLKDNYTDTSYCVKAVGSIASYPGYKTSTLVTTFACPATATVFVPSPVATATLNPTTSGTTINYYLYENTFDATLRSTDLAVANSYDDWAQYTDVTFQELIEWNPSLQLGYYVLQFGNSYYIQKW
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21291.1 | 194 | 4.98 | 0.041 | 48.47 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: