Effector profile
| PlantPEAD ID: PlantPEAD37164 | Uniprot ID: A0A183CAH9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36090 | Pathogen type: Nematoda |
| Species: Globodera pallida | Strain: | Other name: Potato cyst nematode |
| Gene name: | NCBI Gene ID: NONE | |
| Entry name: A0A183CAH9_GLOPA | Protein name: Homeobox domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
NONE
Protein sequence:
MLNPATLQQLWTTVFTPQNIANSAGGGNGTPPTNSFAHQMFPIAAAAAAAASTHHNRRRQQHNNNNPLDTSKTPKQRHLRGREEGSHNDNGHNDREEKRRRRGHQQQQQQQQGDDDCYGDGVVDAEQRRSPVVVVVDGIVEENSGDGTNRSLLDDVDEYEGDRRNRSSSSNLPPGVGQPTADGGGGKGATPKRDNAGGGGGGDKSQSTQPKREQREDGELKEEKSGISPPTNSTADAKIQAQLMQNYLHKMLCAITHQQLSRDNNSQAQLLISRTTTGSPATASTTMANAADSAASSSHSAAPAVVAPPNNAAIPSGSLFPGIPFPKMVFGVNTEQILKKCEQLEESNDVEKLSRFLYGLPPTVQMHIAMHEPVLRARALISYNTGNFKELYSILESHKFSQQCHQKLQHMWWDAHYQEAERMRGRTLGPVDKYRVRKKYPCPPTIWDGEQKTHCFKEKTRTMLRQHYLQDQYPNPAKKKQLAEETGLTAMQVGNWFKNRRQRDRAATAKNKMNGGARLPLGLSPSPKNSRNNGSNTNTNQNDSCDSEFDDDEMRSFSHSHNSSEPEEEERMAVDDAFGCEGAESTEEATGRKQKHFTIGQLTTTAHPHEERRLQNVQDDGRRTGDVEQFIGCGSTMPSAMPAAVFPTIVAPQAAAAATPFNPLHLLFLMHSAAAQQTFLMNDFHNYHHQNQQQQQNTEQAVSKVTCSSHSTPSSTLWPKQPTTTENNAGRNVMANSPENNVISTSMLGRLASIASISHDNLCRYLELIKCQTIPNGVIIVSEHYSAQYCRVQNRNSIVIGSLSIENILFRVSNERVKVKLSHFGLYYISEGNEAIKEAICLPWYLSPECVLNAEEKLSYCSDIWSFGILLVELFTGWQLAQIWSRKQVMSVLRSVVFKTKHGSCLENLLDSVEISCPAFKSSSHCLQNARFVSEKCLQIAPMDRPNSTDLLQLLDEANQQDERILSEEDLAKFGFTTKTVNEVFFLWKLCGSSVESILIRNGIIQNRPPVLAFPRLLVDDFRLYGNEKARKVNLALNVAELPLNNLLERLNSIPRDELYLSLDWIKIRGCDQGNESKAFLSLPLVADSVQSLVVKERDINYQFKRMRLFRRFLSAFPYKSDLLRHECQKDIPPVYRGAVWASLLDVFPAFNGVFPHEDFCQIDTFSEHPSDRQLQVDIPRCHQYDELMSSPMAHYRMKLLIKTLLVSRKDDDFVYWQGLDSLSAPFLILHFNDLSTAFRCLNAFIERYLRGFFLQDNSTVIRNYLAEFMRVLEFVDPELFTHLISLDFHPELFAIPWFLTCFAHVLPLHKLFHLWDSLLLADSQFPLKKVTERQPKRDGAVDNGTTSHSAKPWVEKYRPKKVDEVVYQDEVVSVLKKCVQGADLPNLLFYGPPGTGKTSAAVALCRQLFTTAPLYKDRVLELNASDERGIDIVRHRIKDFSKVAISSARVGKDFVVPLKVIILDEADAMTGPAQSALRRTMESEAQTTRFFLICNYITRIIEPLTS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 169434 | 1507 | 6.97 | -0.507 | 49.2 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR003593,IPR003959,IPR009057,IPR001356,IPR011009,IPR027417,IPR000719,IPR000195,IPR035969,IPR031701
Pfam: PF00004,PF00046,PF00069,PF00566,PF16878
SMART: SM00382,SM00389,SM00220,SM00164
KEGG:
PRINTS: