Effector profile
| PlantPEAD ID: PlantPEAD37329 | Uniprot ID: G4U0N3 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 65672 | Pathogen type: Fungi |
| Species: Serendipita indica | Strain: strain DSM 11827 | Other name: Root endophyte fungus, Piriformospora indica |
| Gene name: | NCBI Gene ID: CAFZ01001293 | |
| Entry name: G4U0N3_SERID | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTTAGCATTCGTTGCAGCTTCTCTTGTCGCCGCCATTGGCACAGTTAATGCCTCTCCTCAAGTAGCGTCTACCACTATCATTTCTGGTGTGACTATGACATACAGCACAGTGAATCCTATCCAGACCGGGATTCAAACATGCGGACGAACCTACTGGTCTGTCTCCGGTGACACATGCAACTCTATCTCTTCGAAGCTTGGCATTAGTGTCTCCCAGATTCAAAAGTATAATGGCTTCCTGAACTGTGATGACATTTGGGTCAACACGCCAATTGCTATCTGCTGGGATACTCCAACACCCTGGAGCACTCCATCTGGTGCCATCACATTTTCATCCTCTGCAACTCCATCGCCACCAGGTTGCCTCACGTATTGGTCTGCGCCTGGCGACACATGCGATTCGATTGCCGCCAAATTTGGATTGAGTGCTACAGAAGTAAAGAATCGCAATTGTTCGTTCTCTCCTTTCCAGTTTATTAGCATCTATTGA
Protein sequence:
MLAFVAASLVAAIGTVNASPQVASTTIISGVTMTYSTVNPIQTGIQTCGRTYWSVSGDTCNSISSKLGISVSQIQKYNGFLNCDDIWVNTPIAICWDTPTPWSTPSGAITFSSSATPSPPGCLTYWSAPGDTCDSIAAKFGLSATEVKNRNCSFSPFQFISIY
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17175.4 | 163 | 4.92 | 0.213 | 27.08 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779
Pfam: PF01476
SMART: SM00257
KEGG:
PRINTS: