Effector profile
PlantPEAD ID: PlantPEAD37454 Uniprot ID: Q20IR2 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 36746 Pathogen type: Bacteria
Species: Pseudomonas cichorii Strain: Other name:
Gene name: HrcV NCBI Gene ID: DQ168848
Entry name: Q20IR2_PSECI Protein name: HrcV
DOI:
Gene/Protein information
Gene sequence:
ATGATCCGCATCATCCATGCACTCAACAACCTCGCGCTGGCGGTGATGAGGCGCACGGAAATCGTCGGCGCGATCATGGTCATGGCCATCGTGTTCATGATGATCCTGCCCTTGCCTACCGCACTGGTGGACGTGCTGATCGCGCTGAACATCTGTATTTCTTCACTGCTTATCGTGCTGGCGATGTATCTGCCGCGCCCGCTGGCATTCTCGACCTTTCCGGCGGTACTGCTGCTGACCACCATGTTTCGCCTGGCACTGTCGATTGCCACTACCCGTCTGATTCTGCTGCAACAGGATGCCGGTCATATCGTCGAAGCATTCGGCAGCTTCGTGGTTGGCGGCAACCTGGCGGTGGGTCTGGTGATCTTCCTGATCCTGACCATCGTCAACTTTCTGGTGATCACCAAGGGGTCGGAACGGGTTGCGGAAGTGGCCGCGCGCTTCACCCTCGACGCGATGCCCGGCAAGCAGATGTCCATCGACAGCGACCTGCGCGCCAACCTGATCAACGTTCGCGAAGCCCGGCATCGTCGCGAGCAGCTGTCCAAGGAAAGCCAGCTGTTCGGTGCGATGGACGGCGCGATGAAGTTCGTGAAGGGTGATGCCATCGCCGGTCTGGTGATCGTGTTCATCAACCTCATCGGTGGTTTTTCCATCGGCGTGATGCAGCACGGCATGGAAGCCGGTGACGCCATGCACCTGTATTCGGTGCTGACCATCGGTGACGGCCTGATCGCCCAGATCCCTGCGCTGCTGATCTCCCTGACCGCGGGCATGATCATCACCCGCGTGGCTCCGGACAGCCAGACCGCCGACGCCAACATCGGTCATGAAATCGCCGAACAGCTCACCAGCCAGCCAAAGGCCTGGGTGTTCGCCTCTCTCGGGATGATGGGGTTCGGCCTGATTCCCGGGATGCCGACCATTGTTTTTGCGTGCATCAGTCTGCTGTGCCTGTTCAGCGGCCTGATCCAGTTGTGGCGGATTCGCCAGAAGGAGCTTTACCAGAATCAGATCGGTGCCGCCGGCAATGCCTCGCCTGAACTCAACGGTCGCGAGGATATACGCCGCTTCAACCCGTCGCGGGCCTATCTGCTGCAGTTTCACCCCAGCCACCAGGGGGTGATGGAACTCGACATGCTGATTCAAGGCATTCGCCAGCGCCGCAACACACTGGTTCACAACTTCGGCCTGACGCTGCCCTCCTTCGATATAGAGTTCGTGGAAAGTTGTGAAATCGACGAATTCCGCTTCTGCGTCTATGAAGTGCCGTTTGTTCGCGCCACCATTTCCCTGACCCACGTGGCCGTCGATATTCGTGATGTCGAGGAAGGCCAGCCCGGCTACCCCGGCCGGATCGACCGCGATGAAGCCCAGTGGATGTGGGTCGATGCGAACGATCCGCTGTTCCAGGACGAGGATATCGTCGGCATACGGCCTCATGAGCTGATCCTTGAACGCATGAGCCGCGCCTTCCAGGCCACCGGCCCGCAATTCATCGGCCTTCAGGAAAGCAAGGCGATCCTCAGCTGGCTGGAATCCGAACAGCCGGAGCTGGCCCAGGAGCTGCAACGCACCTTGCCTCTGGCGCGCTTTGCCGCAGTGCTGCAACGTCTTTCTGCCGAACTGGTTTCGCTGCGCTCGGTCAGGCCGATTGCCGAAACCCTGATCGAACAAGGTCAGCATGAGCGCGATCTCAACGCCCTGACCGACTATGTACGCATCGCCCTCAAGGCGCAGATCTGCCATCAACACAGTGAAGAAAACACCCTCAATACCTGGCTGGTGACGCCGGAAACGGAAGTGTTGCTGCGCGATGCCCTGCGCCAGACCCAGAACGAATCCTACTTTGCCCTTGAACCCGAGCTGGGCAGTGCGCTGCTGGAACAGTTGCGCGAAGCCTTTGCCCTGCAATCGAACCCGCCGTCCAGCCCCAAGGCGGTACTGCTGGTTGCCCAGGACCTGCGCAGCCCCTTGCACAGCCTGCTGGCAGATGAGTTCAACCACGTACCCGTGCTGTCTTTCGCCGAGTTGTTATCCACGGTGCAAGTCAAGGTTCTGGGTCGCATCGACCTGGATGAAGCACAAGCCCTGATGGCCTGA
Protein sequence:
MIRIIHALNNLALAVMRRTEIVGAIMVMAIVFMMILPLPTALVDVLIALNICISSLLIVLAMYLPRPLAFSTFPAVLLLTTMFRLALSIATTRLILLQQDAGHIVEAFGSFVVGGNLAVGLVIFLILTIVNFLVITKGSERVAEVAARFTLDAMPGKQMSIDSDLRANLINVREARHRREQLSKESQLFGAMDGAMKFVKGDAIAGLVIVFINLIGGFSIGVMQHGMEAGDAMHLYSVLTIGDGLIAQIPALLISLTAGMIITRVAPDSQTADANIGHEIAEQLTSQPKAWVFASLGMMGFGLIPGMPTIVFACISLLCLFSGLIQLWRIRQKELYQNQIGAAGNASPELNGREDIRRFNPSRAYLLQFHPSHQGVMELDMLIQGIRQRRNTLVHNFGLTLPSFDIEFVESCEIDEFRFCVYEVPFVRATISLTHVAVDIRDVEEGQPGYPGRIDRDEAQWMWVDANDPLFQDEDIVGIRPHELILERMSRAFQATGPQFIGLQESKAILSWLESEQPELAQELQRTLPLARFAAVLQRLSAELVSLRSVRPIAETLIEQGQHERDLNALTDYVRIALKAQICHQHSEENTLNTWLVTPETEVLLRDALRQTQNESYFALEPELGSALLEQLREAFALQSNPPSSPKAVLLVAQDLRSPLHSLLADEFNHVPVLSFAELLSTVQVKVLGRIDLDEAQALMA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
77638.5 701 5.23 0.304 46.87
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.