Effector profile
| PlantPEAD ID: PlantPEAD37460 | Uniprot ID: A0A0B6S7U8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 41899 | Pathogen type: Bacteria |
| Species: Burkholderia plantarii | Strain: PG1 | Other name: |
| Gene name: SctV | NCBI Gene ID: CP002581 | |
| Entry name: A0A0B6S7U8_BURPL | Protein name: Type III secretion system protein HrcV/HrpO family | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATGCGGTCAGCGTCACGCGGCCGACGGGCTTCAGCTCGACGTGCTCGCCGAGTTCCTGGTACGAATAGACCGACAGCCAGCCGAGCCGCGACTCGATCATGCGCCGCACGTAGCGGCGGATGTCCATCGAGGTGACCAGCACCACGCCCTCACGCGGCGCGGCGCCCGTGAACGACTGGATCCGGTCGATCAGGAACGCGGCGTCGTTGGGCGGCAGCGCGAGGAAGTTGCCGGTCGGCGTCTGCTTGATCGCGGCACGGATGTGCTGCTCGGCCTGCATGTCGAACAGCACCGCCGAGAGCTGCCGCTCGCCCTTGGCGGCGCGATGCGCGAGGAAGCGCGAGAGGTCGCCGCGCACGTACTCGGTCAGCATCAGCATGTCCTTTTCCTTGGCGCCCCAGGCGATCAGGCTCTCCATGATCGAGCGCACGTTGCGGATCGACACCTGTTCCTCCAGCAGCCGGCGCAGCACGTCGGCGATCCGCTGCGGCGGCAGCACCTTCTGCACCTCGGCCACCAGGCCCGGCGCGTCGTGGCTCAGCTGGTCGAGGATCCACTGCACCTCCTGGATGCCGAGGAACAGCGTCGCGTGGCGCTGCATGGCGGCCACGCAGGCGTGTGCGATGACCTGCTCGGCGCGCCACACCGGCGTCTTGGCCGGCACGCCGCGCTCGTCGATCCAGCGCGTGGGGGTGCCCGCCGAGTCGAGCGACGGGCCGTCCTCGGTCTTCTCGGCCAGCGCCTGCAGCTTCTCGGCCGAGGCCGCCGCGACCTCGGCCGGCAGCAGGCGCGTGTCGGGCAGCATCGCCTTGCCGGTCGGGATCGTCACCATCAGGTGCGGCACGTCGTGGATCAGGATCTCGAAGGTGGCGATCGGCAGCGCCGCGTGGACCCACATCGTGATGCCGGGGAACGGCAGCCCGAGCGCCTCCTGCAGCGCCGCGCGCTCGGCCTCGAAGGCGGCGTCGAGGACCGGCATGGCCAGCTTCGCGGCCAGGTCCGGCGAGATCCGCACGCCCACCGCGCAGGCGAACTGCGGCGCGCGCGGCAGGATCGGCGGCACCTCGGTCTTGGCGCCCACGCGCTGCATCGAGGCGAGCGTCTCGGCGCCGCCGTGCTCGCCGTCGCGCGACGAGGGCTTCTTGACCGACAGCCGGTAGCCGGCGAACGACAGCGCCGCGGCCAGCAGCACGAACAGCAGCGACGGGAAGCCCGGCACGATCGCGAAGCCGAGCAGCAGCACCGCGGCGAAGAACAGCGCGCGGGCGCTCGAGCCGAGCTGGTGGCCGATCTCGTCGCCGAGCGAGCGCTGCTTGGTCTGGCGCTCGTCGGCCACCCGCGTGATCATCACGCCGGCGGCCACCGACAGCAGCAGCGAGGGGATCTGCGAGACCATCGCGTCACCGACCGACAGCACCGAGAAGCGGTTCGCCGCGTCGCCGGCCGACATGCCGTGGTAGGCCACGCCCACCGCGATACCGGCCAGGATGTTGATCATCGTGATGATGAGGCCGGCGATCGCGTCGCCCTTCACGAACTTCATCGCGCCGTCCATGCCGCCGTGCAGCTGGCTTTCCACCGCCAGCGTGGCGCGCTTGCGCTTGGCTTCCTCGGGCGTGAGCAGGTTCGCGCGCAGGTCGGCGTCGATGCTCATCTGCTTGCCGGGCAGCGCGTCGAGCGTGAAGCGCGCGCCCACCTCGGCCACCCGCTCCGAGCCCTTGGCGATCACGATGAACTGCACGGTGGTGATGATCGCGAACACCACGAGACCCACCACCAGGTTGCCGCCCACCACCAGCTTGCCGAAGCTCTCGATGATGTTGCCGGCCTCGGCGTGCAGCAGGATCGACTTGGTGGAGGCGATGTTCAGCGAGAGCCGGAACAGCGTGGTGAACAGCAGCAGCGACGGGAACGCCGAGAGCGCCGAGATGTCGGGCACGTACATCGTGATCATCAGCAGCGTCACGCTGATGGTGATGTTCAGGCCGAGCAGCATGTCGATCAGCAGCGGCGGCAGCGGCAGGATCATCAGCGAGATGATCGCCACCACCAGCGCGACGATTCCGATTTCGCCGCCGGCGGGGAGTTTCAGGGACTTCAGCAT
Protein sequence:
MLKSLKLPAGGEIGIVALVVAIISLMILPLPPLLIDMLLGLNITISVTLLMITMYVPDISALSAFPSLLLFTTLFRLSLNIASTKSILLHAEAGNIIESFGKLVVGGNLVVGLVVFAIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRANLLTPEEAKRKRATLAVESQLHGGMDGAMKFVKGDAIAGLIITMINILAGIAVGVAYHGMSAGDAANRFSVLSVGDAMVSQIPSLLLSVAAGVMITRVADERQTKQRSLGDEIGHQLGSSARALFFAAVLLLGFAIVPGFPSLLFVLLAAALSFAGYRLSVKKPSSRDGEHGGAETLASMQRVGAKTEVPPILPRAPQFACAVGVRISPDLAAKLAMPVLDAAFEAERAALQEALGLPFPGITMWVHAALPIATFEILIHDVPHLMVTIPTGKAMLPDTRLLPAEVAAASAEKLQALAEKTEDGPSLDSAGTPTRWIDERGVPAKTPVWRAEQVIAHACVAAMQRHATLFLGIQEVQWILDQLSHDAPGLVAEVQKVLPPQRIADVLRRLLEEQVSIRNVRSIMESLIAWGAKEKDMLMLTEYVRGDLSRFLAHRAAKGERQLSAVLFDMQAEQHIRAAIKQTPTGNFLALPPNDAAFLIDRIQSFTGAAPREGVVLVTSMDIRRYVRRMIESRLGWLSVYSYQELGEHVELKPVGRVTLTA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 75181.4 | 701 | 7.27 | 0.412 | 39.98 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR042194,IPR042193,IPR042196,IPR025505,IPR001712,IPR006302
Pfam: PF00771
SMART:
KEGG: bgp:BGL_2c02200,bpla:bpln_2g02630
PRINTS: PR00949