Effector profile
| PlantPEAD ID: PlantPEAD37622 | Uniprot ID: A0A015M3D8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 588596 | Pathogen type: Fungi |
| Species: Rhizophagus irregularis | Strain: strain DAOM 197198w | Other name: Arbuscular mycorrhizal fungus, Glomus intraradices |
| Gene name: | NCBI Gene ID: JEMT01025668 | |
| Entry name: A0A015M3D8_RHIIW | Protein name: RlpA-like protein double-psi beta-barrel domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGTATCCAATAAAGAAAAAACGCTTCCATCACTTCCATTTTTCAATAAACCCTCAAATGAATCCAATTCTGATTCAAAATTTATGACTCGGTTTTCGGAAAAATTTCCAAAAACAGCTGAATTTTTTAAGAAAAATAAAAAACCAATTATAGTATCATTAATAATATTTTTTATTATAATATTGGTTATAATCATTGTTGCTGCCGTTGGTGGATTTTCAAACGGTGATTCACAAGATACTGGTAAACCTGGTATTAATATGAGTGGTAAAGGAGATGGAACTTTTTATAATCCTAGTGTAGGTACTGGATCATGTGGCTGGCAAAATGATGATAGCGAATTTGTTGCAGCCCTGAATGCTCCCCAATATGGAAAATTTAGTGATCCGGCAGATTCACCGATATGCGGCAAATGTATAAAAATTACCGGACCAAAGGGTTCCGTTAAAGTAAAGTTGGTCGATAAGTGCCCGGTATGTAAACGTGGAGACATTGATATGTCACCAGCGGCATTTAAGAAAATTGCTGAATTAGATGAGGGTAGAGTTCCAATTACTTGGGAAGGCTGCTAA
Protein sequence:
MVSNKEKTLPSLPFFNKPSNESNSDSKFMTRFSEKFPKTAEFFKKNKKPIIVSLIIFFIIILVIIIVAAVGGFSNGDSQDTGKPGINMSGKGDGTFYNPSVGTGSCGWQNDDSEFVAALNAPQYGKFSDPADSPICGKCIKITGPKGSVKVKLVDKCPVCKRGDIDMSPAAFKKIAELDEGRVPITWEGC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20527.7 | 190 | 8.84 | -0.187 | 36.25 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR009009,IPR036908
Pfam: PF03330
SMART:
KEGG:
PRINTS: