Effector profile
PlantPEAD ID: PlantPEAD37670 Uniprot ID: Q2TIM1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 101203 Pathogen type: Oomycota
Species: Saprolegnia parasitica Strain: CBS 540.67 Other name:
Gene name: Chi1 NCBI Gene ID: AY866378
Entry name: Q2TIM1_9STRA Protein name: CHI1
DOI:
Gene/Protein information
Gene sequence:
GTCGGCAACAACGTATATGGGCAGTTTGGCCATGCCAACAAGATGAAGAAGGTCCATCGGCACGCCAAGTTTGGCCTCTCGATCGGTGGCTGGACGCTCAGCGGCCTCTTTAGTGGCTTTGCAGCCACCGAGATGGGCCGTCGTACCTTTGCTTCCAGTGCTGTCCAGCTCATGCTCGACCTTGGCCTCGACTTTATCGATATTGATTGGGAGTACCCGGTCTCGGGCGGCAATGCGATTCCGCACTCGCCCGACGACATGGCCAACTTTGTGCTCTTGCTCCAAGCCCTTCGTGACGCGTACGCGTCGCTGCCGTTTCTCGCCGAGCTCAGTGTCGCGTCGCCGGCCGGGCCCGAGAACTACGTCAACTGGGACTTTCCGTCCGTGTGCGGCCTCGTCGACCACGTCAACTTG
Protein sequence:
VGNNVYGQFGHANKMKKVHRHAKFGLSIGGWTLSGLFSGFAATEMGRRTFASSAVQLMLDLGLDFIDIDWEYPVSGGNAIPHSPDDMANFVLLLQALRDAYASLPFLAELSVASPAGPENYVNWDFPSVCGLVDHVNL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
14943 138 5.33 0.118 39.15
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.