Effector profile
| PlantPEAD ID: PlantPEAD38058 | Uniprot ID: G4TJL9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 65672 | Pathogen type: Fungi |
| Species: Serendipita indica | Strain: strain DSM 11827 | Other name: Root endophyte fungus, Piriformospora indica |
| Gene name: | NCBI Gene ID: CAFZ01000123 | |
| Entry name: G4TJL9_SERID | Protein name: Reverse transcriptase Ty1/copia-type domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
GAAGTCTACATGAGAAAGCCAGAAGGAGTCGAGTTCGAGGGCTATGAAGGCACGAGCTGGGTGCTTCAACTTCTCAAGGGCCTCTATGGAATCAAACAAGGCCCTCGCATCTGGTCTGTGAAACTACACACTGTCCTATCCGAAATTGGATTCAAACGCCTCGAAAGCGATCACAGTGTCTTCAACTACGAGCGTGACAACGTCAAGATTATTGTACCAGTCCACGTTGATGATCTCCTGCTCGCATCAAAATCACCAGACGCCATTCAAATCGTGAAGAATGAACTCAAGGCGCGCTTCAAAATCCACGACCAGGGACCTACCTCATTCTTACTTGGTGACTGTAATGGCACTGACACGCCTATGGCTGAAAAGCTACTCCTCTCGACCAAGGATTCACCACAAACTGAGCAGGAGAAGTTGGAAATGCAGAACGTACCCTATCGAGAGGCCCTTGGAAAACTCATTTACATCGCAACTGCTACTCGACCAGACATCTCATACTCTGTGGGGGTGCTCTGTCGGTTCAGCGAGAATCCTGGACGAGCACACTGGCTAGCTCTCAAACGGGTACTGCGATATCTCCGCAAAACAACAAACTACAAGCTCACCTACGGCCTCGAACCCGACTCCGAACTGTTCACGACGCATAGTGATGCCGATCTGGGTGGAAACGCCGATAATACCCGCTCGACAGCCGGTTTTGTCATGTCAATTGGTGGTGGCGCTGTAATGTGGAGTAGCCGACTCCAGCGCCACACATCACTATCATCAACAGAGTCGGAGTATACAACAACCTCCGCCACCGGGTGCGAAATAATCTGGATGCGGTCATTCCTCGATGAAATTGGCTACCACATTGCGTCCTATCCATCCACCCTATTTGTTGACAACGCCTCTGCCATCCAAGTTGCCAAGAACCCAGAAAATCAGTCCACCATGAAGCATGTTCACCGTAGCTTCAACTGGATTCGCGAGAGAGTTGCCAATAATGAAATC
Protein sequence:
EVYMRKPEGVEFEGYEGTSWVLQLLKGLYGIKQGPRIWSVKLHTVLSEIGFKRLESDHSVFNYERDNVKIIVPVHVDDLLLASKSPDAIQIVKNELKARFKIHDQGPTSFLLGDCNGTDTPMAEKLLLSTKDSPQTEQEKLEMQNVPYREALGKLIYIATATRPDISYSVGVLCRFSENPGRAHWLALKRVLRYLRKTTNYKLTYGLEPDSELFTTHSDADLGGNADNTRSTAGFVMSIGGGAVMWSSRLQRHTSLSSTESEYTTTSATGCEIIWMRSFLDEIGYHIASYPSTLFVDNASAIQVAKNPENQSTMKHVHRSFNWIRERVANNEI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 37570.6 | 333 | 6.61 | -0.392 | 31.46 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR043502,IPR013103
Pfam: PF07727
SMART:
KEGG:
PRINTS: