Effector profile
| PlantPEAD ID: PlantPEAD38089 | Uniprot ID: G4U0D8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 65672 | Pathogen type: Fungi |
| Species: Serendipita indica | Strain: strain DSM 11827 | Other name: Root endophyte fungus, Piriformospora indica |
| Gene name: | NCBI Gene ID: CAFZ01001204 | |
| Entry name: G4U0D8_SERID | Protein name: Reverse transcriptase Ty1/copia-type domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGGAATGCTCTCGATTCGCACACTGAGAAGTGCATCTTTGTCGGGTACCCATCCGACCGCCCTGGCTGGGTGTTCTGGAACCTGCAGACACGCAAGATTATACACAGCGACAGCGCTGTATTCGATGAGAGAGTCTTTCCGGGCACCTCGTTTGCAAAGGAACCGACCCCAAACCTCTCTGACTACATCCAGCTGCCAGATCTCGAGGAAATCAACACCTCTTCATCATCCATTCCACCTCCAGACACTCATCCTCCTGTCCACGTTGCAGGGCGACCTGTACCAGCACCTATTCCCCACGAGCCTGTCCCTCCACCAGCACCAGCGCCTGCGCAGCCTAAACCCACAGGTCCCCAGCGTCTGAGTCGTGAACTTCGAGCACTCACTGACCAGACCAATTTTGAGAAGGTTCCTACGAACCTCCCGGCACGACGATACACAGTTGCGCGTCAGCCAGACACTTTGACTGAATCCGACTCGGATCTCGAACTAAATGAGAGCTCCGACGAAGATAATGCCCAATTAGCTGCTGAAGACGCATCCCTACCCTCGAATTCCAGCTGTTATGTGCCAACTAAAGCTCGACGCTGGAGACCCAAGCCGAACTTCAAAGCGCCCGATCACATCCTGATTCCCATTGCTGATGGTATCGAAGCTGCTTTAAACACGTCTACAAGCCGCGAGCCAACAACACTGGGAGAGGCCCTGAAACGCCCTGACAGCGACAAGTATGTCCAAGCGGCTATAGAAGAGGTCAGAGCTCACCTGGAAAACGGCACGTGGAAGCTTGTGCGACTTCCACAAGGCAAAAAGGCTATCGGCTCACGTTGGGTATTCAAAATCAAGCGTGATGCCGATGGGTCTATTAGCAAATACAAGGGACGAATTGTGGCAAAGAGATATGCACAACGAGAGGGAATTGACTACACAGAGACCTTTGCACCAACAGTTCGCTTTGGTGCCCTTCGCACCATCATAGCACTCGCAGCGCTCGAAGACTGGGAGCTAGAGTCAGTAGACATATCAACCGCCTTTCTCAATGGTGAGATTGATGCAGAGGTCTACATGCGAAAGCCAGAAGGAGTCGAGTTCGAGGGCTATGAAGGTACAAGCTGGGTGCTTCAGCTTCTCAAGGGTCTCTATGGAATCAAACAAGCCCCTCGCATCTGTCATCCGAAGCTATCCAAATGGTGA
Protein sequence:
MRNALDSHTEKCIFVGYPSDRPGWVFWNLQTRKIIHSDSAVFDERVFPGTSFAKEPTPNLSDYIQLPDLEEINTSSSSIPPPDTHPPVHVAGRPVPAPIPHEPVPPPAPAPAQPKPTGPQRLSRELRALTDQTNFEKVPTNLPARRYTVARQPDTLTESDSDLELNESSDEDNAQLAAEDASLPSNSSCYVPTKARRWRPKPNFKAPDHILIPIADGIEAALNTSTSREPTTLGEALKRPDSDKYVQAAIEEVRAHLENGTWKLVRLPQGKKAIGSRWVFKIKRDADGSISKYKGRIVAKRYAQREGIDYTETFAPTVRFGALRTIIALAALEDWELESVDISTAFLNGEIDAEVYMRKPEGVEFEGYEGTSWVLQLLKGLYGIKQAPRICHPKLSKW
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 44389.1 | 398 | 6.13 | -0.574 | 48.05 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013103
Pfam: PF07727
SMART:
KEGG:
PRINTS: