Effector profile
| PlantPEAD ID: PlantPEAD38157 | Uniprot ID: A0A834S2K3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 45151 | Pathogen type: Fungi |
| Species: Pyrenophora tritici-repentis | Strain: M4 | Other name: Drechslera tritici-repentis |
| Gene name: | NCBI Gene ID: NQIK02000002 | |
| Entry name: A0A834S2K3_9PLEO | Protein name: Reverse transcriptase Ty1/copia-type domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTTTATCCACAAAGAAAAACAACTCCGTATCCTCGTCTACGTTGATGACATTGCTGCTGCTGCAAAAGATCGAGCTCAAATTGATTGGTTCTACGAGAAGCTTTCTGGAAGATTCAACACCAAGAACCTGGGGGAGATTCATAAGATCCTTGGAGTACGAGTTACGCGAGACAGAAAGCGCCGCACAATCTACCTCGATCAAGAGCAGTACCTACACGCAGTACTTGACAAGTTTGGAATGTCTAGCAAACAACACAGAGACAAGAAGATTCCATCTGCAGATTACACTTCATTTAGGCCAGCCACTGACAACGACACCCGAATCGACATCACTGAATACCAGCAAGTGATAGGGAGCCTTATGTTTGCTATGGTTCTTACACGTCCAGACATTGCATTCACCCTCGGAAAGCTAAGCCAATACATGAGCGATCCAGCAGAACACCATGGCCATGCGTTGAAGAACCTGCTACGATATCTAAGGTCGACAGTGACATTGAAGCTACGCTACGGACCAGGGGACGACATGGTAGACCGAAAGAGCGTTTCAGGGAGCACTGCAATGTTCTACGGAGGTCCAATATCATGGTCTAGCAAGAAGCAACGGTCTGTTGCAACGTCAAGCTGCGAATCTGAATACATCGCACTATCAACATGCTGCAAGCAAGGCCAGTGGATTGCTCAAATGTTTAGAGATCTTGGGTTCCCAAAGTACATTGGAAAAGACACCAACAAGGTCCAGATGCTAGGAGACAACCAGGGTGCCATTGCACTTACAAAGAACCCTCACCTTCACGAAAGATCAAAGCACATCGACGTCTGTTATCATTTTATCCGAGACCTAGCAGAACAAGGCAAACTCGATGTGGCCTACGTTCCAACTGCAGACATGGTGGCTGATGGAATGACAAAGCCATTGCAGCGAGTCGCATTCGAGAGATTCAAGAACCAATTAGGAGTTGTCCTTGGACCGGACCTGCCCTGA
Protein sequence:
MFIHKEKQLRILVYVDDIAAAAKDRAQIDWFYEKLSGRFNTKNLGEIHKILGVRVTRDRKRRTIYLDQEQYLHAVLDKFGMSSKQHRDKKIPSADYTSFRPATDNDTRIDITEYQQVIGSLMFAMVLTRPDIAFTLGKLSQYMSDPAEHHGHALKNLLRYLRSTVTLKLRYGPGDDMVDRKSVSGSTAMFYGGPISWSSKKQRSVATSSCESEYIALSTCCKQGQWIAQMFRDLGFPKYIGKDTNKVQMLGDNQGAIALTKNPHLHERSKHIDVCYHFIRDLAEQGKLDVAYVPTADMVADGMTKPLQRVAFERFKNQLGVVLGPDLP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 37372.9 | 328 | 9.34 | -0.446 | 34.12 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR043502,IPR013103
Pfam: PF07727
SMART:
KEGG:
PRINTS: