Effector profile
| PlantPEAD ID: PlantPEAD38268 | Uniprot ID: A2T2K1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 123356 | Pathogen type: Oomycota |
| Species: Hyaloperonospora parasitica | Strain: | Other name: Peronospora parasitica |
| Gene name: | NCBI Gene ID: DQ642030 | |
| Entry name: A2T2K1_9STRA | Protein name: Retrotransposon element | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCACTTGATGACAGCGACACGACCGGACATTGCTTTTGCTGTGAGCTACGTTTCGCGCTTCATGGAGAAACCCCAAGTCGAGAACTGGACAGCGGTCAAGCGTATTCCTCGATACTTGCGAGGAACCAAATCGCATGGCATCTGCTTCAACCCGGCGACAAGGTGGACTCCTGCGGCTACTCGGATGCAGACTGGGCCCGCGACCATGCAGATCGCAAGTCTACTTCGGGATACGCCCGAAGTGGGCTTCACGCATCACATCTGCCGTGACAGAAACAAGTTCGAAGTTCCGGACGAGCGGAATGAAGGCGAAGTGTTGGTCGCATATGGGAACAAGGCTGCGATCAAAGGTGTGGGGACTATCGTCGAAAACGTGGTCCTGTCCAACGGTGGAGAGCGCGAGATCGAGATCAAGAACGCGCTTTACTTCCCAAGAATGAGCAAGAATCTGCTGTCGATTCCGCAGATCAACAAAAGGGGCAACTTTCAAGCGATGTTCGATGGCGCCGCGATGAAGATTTCGCGCAAAGACTTCGAGCAAGCGATTGCGATGGAGGATCTTGCAGACGAACTCTACTGGCTTCGTACATTGCAACGTCCCGTGACTGCTATATCGCGAACATGA
Protein sequence:
MHLMTATRPDIAFAVSYVSRFMEKPQVENWTAVKRIPRYLRGTKSHGICFNPATRWTPAATRMQTGPATMQIASLLRDTPEVGFTHHICRDRNKFEVPDERNEGEVLVAYGNKAAIKGVGTIVENVVLSNGGEREIEIKNALYFPRMSKNLLSIPQINKRGNFQAMFDGAAMKISRKDFEQAIAMEDLADELYWLRTLQRPVTAISRT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23573.2 | 208 | 9.57 | -0.364 | 33.97 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: