Effector profile
| PlantPEAD ID: PlantPEAD38474 | Uniprot ID: A0A507C358 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 286115 | Pathogen type: Fungi |
| Species: Synchytrium endobioticum | Strain: LEV6574 | Other name: |
| Gene name: | NCBI Gene ID: QEAM01000859 | |
| Entry name: A0A507C358_9FUNG | Protein name: Reverse transcriptase domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATGACAATCGTAACGCCTCCATCACTATCAAGTATAAATAACATGATAGTGGGTCGCCTTGTCTTAAACCTCGTTGAGCCTTCTCTTCCGGGGTCAAGTTTCCGTTGATTTTCACTCTGAACTTTGATTTCTCGTTCATTTGTTCTACAAGTTTGATAAAGTTATCTGGAAAATTCCATATCCTTAACAGTTTGTATAGGAATTTGTGATCTACTCTGTCGTATGCCTTTTCCTGATCTAGGAAGACTATGACCCCTTCATTGTTCCCTTTGTTTACACATTCTGCCAACAATTGTGTCTCCATAATGCTTGTCTTTAATTTGCCTTCGTGGTAGGAACGCAT
Protein sequence:
MRSYHEGKLKTSIMETQLLAECVNKGNNEGVIVFLDQEKAYDRVDHKFLYKLLRIWNFPDNFIKLVEQMNEKSKFRVKINGNLTPEEKAQRGLRQGDPLSCYLYLIVMEALRLS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13411.6 | 114 | 8.89 | -0.459 | 26.57 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000477
Pfam: PF00078
SMART:
KEGG:
PRINTS: