Effector profile
| PlantPEAD ID: PlantPEAD38477 | Uniprot ID: A0A507CG25 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 286115 | Pathogen type: Fungi |
| Species: Synchytrium endobioticum | Strain: LEV6574 | Other name: |
| Gene name: | NCBI Gene ID: QEAM01000419 | |
| Entry name: A0A507CG25_9FUNG | Protein name: Reverse transcriptase domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGAAAGCACAATTTACAATGGTCAGAGTTAGGAGAAAAATGTACCAAGTGGTATGTTGACAAAATAAGACCTGCAGTAATGAAGAATACTGTTATTAAAGGCCTTAAAGATACAAGTGGTAAAGTATTGACAGAACCAGAAGCAATACAAAACCATGCACGGAAATACTATAAGGCACTCTTCAGCAACGAAGAAACCGATCCGGAAATTCAGGAGGAAATCCTGGAAAGTACTTTGAAAAACATGAAAACACTGCAGATATCAAAAGCAGATCAAAAACTACTTGAGGATCCGATAGGTGAAAGTGAAATCAAAAATGCATTGAAACAATTGAAGAATGGTAAGGCACCCGGACCAGATGGGATCACTACCGAGTTCTATAAAAAATTTCCGGACATTGTGAAAAATTCCTGCTACCGATCTTTAACCGGATCTTAA
Protein sequence:
MRKHNLQWSELGEKCTKWYVDKIRPAVMKNTVIKGLKDTSGKVLTEPEAIQNHARKYYKALFSNEETDPEIQEEILESTLKNMKTLQISKADQKLLEDPIGESEIKNALKQLKNGKAPGPDGITTEFYKKFPDIVKNSCYRSLTGS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 16660.1 | 146 | 8.94 | -0.812 | 39.97 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: