Effector profile
| PlantPEAD ID: PlantPEAD38482 | Uniprot ID: A0A507D1H5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 286115 | Pathogen type: Fungi |
| Species: Synchytrium endobioticum | Strain: LEV6574 | Other name: |
| Gene name: | NCBI Gene ID: QEAM01000144 | |
| Entry name: A0A507D1H5_9FUNG | Protein name: Reverse transcriptase zinc-binding domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATTCATCCATTTGTTCCAGATTCTTAATGATTTGTGCCCACATTTCCTGCCCCTTGTCGGTAGCTGCCTCCTTTTTAACTAATATTGTCAGGGTCTTTAGACCGTTTTTGATGTTCATGTCTACTCCCTGTTTTACCCAATTGCAGTAACTTAACCACTGGGTTTGGAGTAGTGTGCAGTATATTCTAATCTTCAACCCCGTTTCCGGTGTTAGTGCCTTTCTGTTATATTTCAGGTTTGTTTCTGGCGTTGTTTGTACCATTTCTATCATGTCATATGTTCCAATTTTTCCGGCTATTCCTTTTAGAATTTTACATTCCGAGAATAGGTGCCTTATTCTAGCTTTTCCTTTTCCGCAAGCGCATTGATCATGCGGATTACGGGTCGGGTCTATTTTTCTAGGAATTCTGTTTATCAAGATGCGCCATACTCTTTGTCTAGTTTTTGGTCTCAGTTTAAGCCTCCATAGGTTCTGTAATGCTTGCGGTGATACCACTTCGTCTGTATCATTTCCACAGTACATTTCTCTCAAGTGCCTGTACCATTTTTTGCATGATGTATCCTTTATTAGGATCTCTTTTCTCAATTTTAGTCCTATGGATTCTCCCCAATTTATATCTCCTGTCTTCATTGGGTCTTCAGGGAATGCAAATTTATATATACATAATGTGTGTTTCGCTTGTTCTATGTTCGTTGCTGATTGAGGATTCACATCCAT
Protein sequence:
MDVNPQSATNIEQAKHTLCIYKFAFPEDPMKTGDINWGESIGLKLRKEILIKDTSCKKWYRHLREMYCGNDTDEVVSPQALQNLWRLKLRPKTRQRVWRILINRIPRKIDPTRNPHDQCACGKGKARIRHLFSECKILKGIAGKIGTYDMIEMVQTTPETNLKYNRKALTPETGLKIRIYCTLLQTQWLSYCNWVKQGVDMNIKNGLKTLTILVKKEAATDKGQEMWAQIIKNLEQMDE
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 27837.5 | 239 | 9.5 | -0.597 | 35.37 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: