Effector profile
| PlantPEAD ID: PlantPEAD38485 | Uniprot ID: A0A015J4Z1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 588596 | Pathogen type: Fungi |
| Species: Rhizophagus irregularis | Strain: strain DAOM 197198w | Other name: Arbuscular mycorrhizal fungus, Glomus intraradices |
| Gene name: | NCBI Gene ID: JEMT01025020 | |
| Entry name: A0A015J4Z1_RHIIW | Protein name: Reverse transcriptase domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAATGCAAGATTATCAACAATTCTTCAGAAAAACAAAATTCTTAAAGGTTTACAATTTGCTGGATTGCCTTTCAGTTCAACTTTTGAACCATTAAGAATTATTAATGAAATAATTCAAGATGCTAATGAGAATGATAAGGAACTGTGGATTTTATCATTAGACATGTCAAAAGCGTATGATCGTGTTAATATTTTTATGTTAGAAAAAGCAATGCAACGTCTTAAAATACCAAGTTCTTTTATTAATTTAACAAAAGAGTTGTTTTTAGGACGGAAAAATAGTGTATTTACAGCAGGAGGATTAAGTAATCCATATGATGTAATGGTTGGAATCGATCAAGGGGAAATAATCTCACCACTTTTGTGGTGTATATATTATGATCCACTTTTTACTGCCATACAGCAAGAACACTTTGGATATCGTGTAAAGGCAAAAAGAAAATCAATTTATATGAAAATATAG
Protein sequence:
MNARLSTILQKNKILKGLQFAGLPFSSTFEPLRIINEIIQDANENDKELWILSLDMSKAYDRVNIFMLEKAMQRLKIPSSFINLTKELFLGRKNSVFTAGGLSNPYDVMVGIDQGEIISPLLWCIYYDPLFTAIQQEHFGYRVKAKRKSIYMKI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17770.9 | 154 | 9.32 | -0.06 | 47.79 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR043502,IPR000477
Pfam: PF00078
SMART:
KEGG:
PRINTS: