Effector profile
| PlantPEAD ID: PlantPEAD38494 | Uniprot ID: A0A225WF39 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4795 | Pathogen type: Oomycota |
| Species: Phytophthora megakarya | Strain: zdho120 | Other name: |
| Gene name: | NCBI Gene ID: NBNE01001012 | |
| Entry name: A0A225WF39_9STRA | Protein name: Reverse transcriptase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTACATCAGATCCACAAATCGTAAGTCAAATCCGAAGTGTCGAAGCACTTCGAACTGATACACCCGGTCAACAGTATCGTATTCCTTCGCGAAATCGAGTAATAAGATCCCTGGGGTATCTCCGGGAAGTCCCTGTTGGTCTCGGTAAACTGTCTCAAGTACTGCTAGCATCATCGCCACAGAACGGTCCATTTGCCGTCCGTGGACAAACCCTTGCTGCGTATCCCCGATGAGCTTCCCCAGGAATGATTGGAGCCGGGTGGCAAGAATCTTCGCAAATATCTTGTAGCTGGACTGGAGAAGTAAGATAGGTCGGTAGTCTAACGCGTTGGAGGAATCTCCTTTTTTTCGCAGCGGTCCTACCACCGCTTTCAGAAAGGATGCCGGTGGTGGGGCCCCTTGTAATAAGCTATTACATGTTTGAGCCAGTTTGGGAGCTATCACGTCTGCATAATCCGCGTAGAAATCATTGTTGAGACCGTCTTCTCCTCCCGCTTTGCGACGACTAAGTCCCCGGACGGCCACCAGTATATCGTCCTCCGTAATAGGGGCTAACAGAGATGTGTTTTCCGCCTTGGATACCCTGCACTCCGTCGGAATCCGCACGTAGTGTGCGACAGCGTCTGCCAT
Protein sequence:
MADAVAHYVRIPTECRVSKAENTSLLAPITEDDILVAVRGLSRRKAGGEDGLNNDFYADYADVIAPKLAQTCNSLLQGAPPPASFLKAVVGPLRKKGDSSNALDYRPILLLQSSYKIFAKILATRLQSFLGKLIGDTQQGFVHGRQMDRSVAMMLAVLETVYRDQQGLPGDTPGILLLDFAKEYDTVDRVYQFEVLRHFGFDLRFVDLM
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23140.6 | 209 | 6.3 | -0.049 | 43.27 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000477
Pfam: PF00078
SMART:
KEGG:
PRINTS: