Effector profile
| PlantPEAD ID: PlantPEAD38653 | Uniprot ID: A0A225X492 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4795 | Pathogen type: Oomycota |
| Species: Phytophthora megakarya | Strain: zdho120 | Other name: |
| Gene name: | NCBI Gene ID: NBNE01000012 | |
| Entry name: A0A225X492_9STRA | Protein name: Ras-related protein Rab | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGCGAGCGTCGAGTGAATGCCGCGCAAGACGCGGTCATCAAAGTGCTGGTGCTGGGCGACGCGGCGACAGGCAAGACAAGTATCATCAAGCGATACGTGCACGACGCCTTCTCGGAGCACCACCGCACGACCATCGGCGTGGACTTCGCGCTCAAGGCGGTGACCGTGAGCGGCACGACTGTGCGGCTGCAGCTCTGGGACATCGCAGGACAGGAACACTTCCGAGCGCTCAACCGAGTCTATTACAAGGACGCACTGGGCGCTCTACTCGTGTACGACATGTCTCGACCGGAGACGTTTGACAGTATCCTCAAGTGGAAGAAGGAGATCGACTCCAAAGTGGAGCTGCCCAATGGCAAACCGCTTCCGGTCATTCTTTGTGGCAACAAGTGTGACCTGAAAGAAGACGTGGACCGGGACTTCCTGGACGAGTTCTGCAGAACGAACAACTTTACGGGCTGGTTTGACACGTCTGCAAAGGAGAATATTCACATTGACGACGCTGCGAAGGCGCTGGTGACAGGCATTTTGGAGCACCAGGATATTTTCGAGCGGAAATCTGAGGCGAAGAAGCGCAACGATACCTTCCGCCCCACAAGTGCTGCCAATGGCAACGCAAACCAATCCAGCTGGTGCTGCAACAGCTTTTAG
Protein sequence:
MSERRVNAAQDAVIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVSGTTVRLQLWDIAGQEHFRALNRVYYKDALGALLVYDMSRPETFDSILKWKKEIDSKVELPNGKPLPVILCGNKCDLKEDVDRDFLDEFCRTNNFTGWFDTSAKENIHIDDAAKALVTGILEHQDIFERKSEAKKRNDTFRPTSAANGNANQSSWCCNSF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24441.6 | 217 | 6.6 | -0.409 | 37.21 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417,IPR030697,IPR005225,IPR001806
Pfam: PF00071
SMART: SM00175,SM00176,SM00173,SM00174
KEGG:
PRINTS: PR00449