Effector profile
| PlantPEAD ID: PlantPEAD38660 | Uniprot ID: A0A2P4XVY1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 611791 | Pathogen type: Oomycota |
| Species: Phytophthora palmivora | Strain: var. palmivora | Other name: |
| Gene name: | NCBI Gene ID: NCKW01007827 | |
| Entry name: A0A2P4XVY1_9STRA | Protein name: Rab18 family GTPase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGACGGCTACGACCATTTATTCAAGCTCCTTCTGATTGGAGATGCCGGTGTTGGCAAGAGCAGTATGCTGCTCCGATTCACGGACGACACGTTCGATGACAACCTGCAGAGTACAATTGGTAAGGATGGGAGCATGCGGTGGTCTGGAATTCTACTCATTAAGGGCTGTACAGGTGTGGATTTTAAGGTGAAAATGATGCAAGTGGACGGCAAGAAGATCAAAATGACTATTTGGGACACCGCCGGCCAGGAGCGCTTCCGCACGCTGACCAGTTCATATTATAGAGGCGCCCAGGGCATTGTTCTGGGTGAGCAATTAGAAATTCTGTTGGATGAAGAGTATTTCTTACGGTTGTGCTGTTGCTCGCAGTCCGTCGCTCGGCGAGACACGTTCGAGAATCTGGACCTGTGGCTGCAGGAGGTGGAAGTGTACAGCCCAGCTGGTGGACGTGACGTAGTGAAGCTGCTTGTGGGAAACAAGATTGACAAGGTACGCTCGGTCATGAGTGATTCGCAACGCATTGAACATGAATTAATTGGCATAAATTATCAGGAACGAGTGGTGAGCCGACGAGAGTCAGAAAGCTGGGCACGGTCTAAAGGCATTATTTTTGTCGAAAGCAGTGGGAGGACGCTGATCGGCATTCAGCAAGTGTTCAACGAAGTAGAACAAAAG
Protein sequence:
MDGYDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGKDGSMRWSGILLIKGCTGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLGEQLEILLDEEYFLRLCCCSQSVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKVRSVMSDSQRIEHELIGINYQERVVSRRESESWARSKGIIFVESSGRTLIGIQQVFNEVEQK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25680.4 | 226 | 5.58 | -0.254 | 46.45 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417,IPR005225,IPR001806
Pfam: PF08477
SMART: SM00175,SM00173,SM00174
KEGG:
PRINTS: PR00449