Effector profile
PlantPEAD ID: PlantPEAD38663 | Uniprot ID: A0A2P4YQJ8 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 611791 | Pathogen type: Oomycota |
Species: Phytophthora palmivora | Strain: var. palmivora | Other name: |
Gene name: | NCBI Gene ID: NCKW01000741 | |
Entry name: A0A2P4YQJ8_9STRA | Protein name: Rab6 family GTPase | |
DOI: |
Gene/Protein information
Gene sequence:
ATGACGACAGCCGAGGCGACGGACAAGGAGGACAAGGCGCCGGCTTCCGAGGCCCCTGCGGCCTCTAGTGAAGGCGAGACGGAGGTAGCTGATGCCAATGTGAATGTGCCGCAGATCGCGCCTCTGGCCAAGTACAAACTGGTGTTCCTGGGCGACCAGGGCGTGGGTAAGACGTCCATGATCACGCGCTTCATGTACGATACGTTCGACAACGCGTACCAGGCCACGATCGGCATCGACTTTCTGTCCAAGACCATGTATATGGAGGACCGCACAGTGCGGCTGCAGCTCTGGGACACAGCGGGCCAAGAACGCTTCCGGAGCCTCATTCCCAGCTACATTCGTGACTCGTCAGTGGCTGTTGTGGTCTACGACATCACAAATCGTGCGTCGTTCCTTAACACCAGCAAGTGGATCGAGGACGTACGTACCGAGCGTGGACAGGATGTGGTGATTATGCTGGTGGGCAACAAGACGGACATCTCGGATCGACGTCAGGTGTCTATTGAGGAGGGCTCGGACAAGGCGAAGGAGGAGAACGTCATGTTCATCGAGACGAGTGCCAAGGCTGGATACAATATCAAGGCACTCTTCCGCAAACTAGCTACTGTGCTTCCTGGCATGGAAAACACGATGATTAGTGGAGACTCGAACTGTATGTTGACTGCTATTGCTCTGGTGCTTGATGTGGTTTTACTGATTTTACTGACTGTTGCATTGCTGTTGGACTGCAGTGATTGA
Protein sequence:
MTTAEATDKEDKAPASEAPAASSEGETEVADANVNVPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSNCMLTAIALVLDVVLLILLTVALLLDCSD
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
27118.9 | 246 | 4.61 | -0.043 | 44.33 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR027417,IPR005225,IPR001806
Pfam: PF00071
SMART: SM00175,SM00176,SM00173,SM00174
KEGG:
PRINTS: PR00449