Effector profile
PlantPEAD ID: PlantPEAD38724 Uniprot ID: A0A015JUW3 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 588596 Pathogen type: Fungi
Species: Rhizophagus irregularis Strain: strain DAOM 197198w Other name: Arbuscular mycorrhizal fungus, Glomus intraradices
Gene name: NCBI Gene ID: JEMT01029756
Entry name: A0A015JUW3_RHIIW Protein name: E3 ubiquitin-protein ligase RAD18
DOI:
Gene/Protein information
Gene sequence:
TTATGAAATAGAACAGCCACGGGCAAACCACCATTGATCCCGTAAACTTGATATCCATTCTACAATCAATTTTAATCGTTCTCGAACAGATCTTAATTCTAATAATTTATATTTTTCACCTTCAGCTATTGGAATCACTGAAGCGACCCAATAAGAAAAATCTGAAGGATCATCTGGCATATCTCCATATACTGAATTAAGTCTTTGTAAAAGCCAAGGAGAATTTCCATTACGTAGAGTCTCTATGAAATCACGTGATATGCCAATTAATTCTGAAGTGGTGTATTCCCTTATTGGATTATTTAATGGATTACTAGTATTATAAATTTCAGCACGTCTTAATTCTTCTCTCTCAATTCTTTCCTCTTCTTCAGGACTAATATCATCAACTCGTTCAACTCTTCCAACATCATATCCATCTTTTGAACCTTTTTCAATTACTTTAAATTTATAAGTACCAATTGTTTCAACAAGAGAACGTCCATCAGCCAAAAATTCTGCAGACCTTATTTCCAACATTGTTCCAAAATCTTGATAAGTATTACTACATGCTAATACCATTCCAAATTGTCTTTGACGTGATTGCATACATCTTCGAATCATTAACCTATATTTTGGTTCAAATACATGAAGGAAACAAGGCATTTTTGGAAATACCAAAGCATTTGTAACAAAAATTGGAGTATCTTGCATTGTATTAAATAATTCACTGTCTAATAAATATCTTCTTTCAGAATATAATGATGGATATAAAGCTCTTATAAAAGAATAAATAGTTTTGTTTATAGGATGATGTAAATAAGCATTATAATTATGAAGTGGTTGTCTACAAATAGGACAAGCTGAATTATGATCAAGTGAACGTGTTATACAAGGTTTACAAAAACTATGACCACAAGGAGTAGTTATTGGATCAATAAATAAAGAATAACATATTTGACAATCTAATTCAGTCATTAATAATTCTTTGATTCTTATTATATCAAGATTATTATCAACTTGTAAATTATTTGATTCTGTACCACCTCTAAAAATATTATTATTAATTATCGAATTTGATATATTATCATCATCATCATCATCCGAATCTGATATATTTTGATAATGATATTCATTTAATAAACGAAAATCATTTTCATCATTATTATGATGATTATTATTATATTGTCTTGTTATTAAAGGTAAAAAAGCCGCTAATTCTTTTCGACTTGTATCAGTTAATTTTTGTAATATTACATCTGTTTTACAATCAAGTGAATGAGATCTTCCACATCCAAAAATAGGACATTTAAATTTTCTATTCAATTGATATGTCGGATTTGGAAGACATCCACGACATATAGAATTTCCACATTGAAAAGTGATGGGGTCTTTGAAAACATTTTGACATTCTGGACATGTTAAATATTGTAAAACTACAAGAGCATCCGATATATTATTATTATCATGATCTTCATTTTCCAGAGTATATGATTCTGTTGTCATTTGTACATCTTCTTCATTGTCTGTATTTAATAATGACATTATGTTCAT
Protein sequence:
MNIMSLLNTDNEEDVQMTTESYTLENEDHDNNNISDALVVLQYLTCPECQNVFKDPITFQCGNSICRGCLPNPTYQLNRKFKCPIFGCGRSHSLDCKTDVILQKLTDTSRKELAAFLPLITRQYNNNHHNNDENDFRLLNEYHYQNISDSDDDDDDNISNSIINNNIFRGGTESNNLQVDNNLDIIRIKELLMTELDCQICYSLFIDPITTPCGHSFCKPCITRSLDHNSACPICRQPLHNYNAYLHHPINKTIYSFIRALYPSLYSERRYLLDSELFNTMQDTPIFVTNALVFPKMPCFLHVFEPKYRLMIRRCMQSRQRQFGMVLACSNTYQDFGTMLEIRSAEFLADGRSLVETIGTYKFKVIEKGSKDGYDVGRVERVDDISPEEEERIEREELRRAEIYNTSNPLNNPIREYTTSELIGISRDFIETLRNGNSPWLLQRLNSVYGDMPDDPSDFSYWVASVIPIAEGEKYKLLELRSVRERLKLIVEWISSLRDQWWFARGCSIS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
58912.4 510 5.07 -0.488 47.89
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.