Effector profile
PlantPEAD ID: PlantPEAD38732 | Uniprot ID: A0A915ZDQ7 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 588596 | Pathogen type: Fungi |
Species: Rhizophagus irregularis | Strain: CHB12 | Other name: Arbuscular mycorrhizal fungus, Glomus intraradices |
Gene name: | NCBI Gene ID: CAGKOT010000031 | |
Entry name: A0A915ZDQ7_9GLOM | Protein name: Uncharacterized protein | |
DOI: |
Gene/Protein information
Gene sequence:
ATGTCATTATTAAATACAGACAATGAAGAAGATGTACAAATGACAACAGAATCATATACTCTGGAAAATGAAGATCATGATAATAATAATATATCGGATGCTCTTGTAGTTTTACAATATTTAACATGTCCAGAATGTCAAAATGTTTTCAAAGACCCCATCACTTTTCAATGTGGAAATTCTATATGTCGTGGATGTCTTCCAAATCCGACATATCAATTGAATAGAAAATTTAAATGTCCTATTTTTGGATGTGGAAGATCTCATTCACTTGATTGTAAAACAGATGTAATATTACAAAAATTAACTGATACAAGTCGAAAAGAATTAGCGGCTTTTTTACCTTTAATAACAAGACAATATAATAATAATCATCATAATAATGATGAAAATGATTTTCGTTTATTAAATGAATATCATTATCAAAATATATCAGATTCGGATGATGATGATGATGATAATATATCAAATTCGATAATTAATAATAATATTTTTAGAGGTGGTACAGAATCAAATAATTTACAAGTTGATAATAATCTTGATATAATAAGAATCAAAGAATTATTAATGACTGAATTAGATTGTCAAATATGTTATTCTTTATTTATTGATCCAATAACTACTCCTTGTGGTCATAGTTTTTGTAAACCTTGTATAACACGTTCACTTGATCATAATTCAGCTTGTCCTATTTGTAGACAACCACTTCATAATTATAATGCTTATTTACATCATCCTATAAACAAAACTATTTATTCTTTTATAAGAGCTTTATATCCATCATTATATTCTGAAAGAAGATATTTATTAGACAGTGAATTATTTAATACAATGCAAGATACTCCAATTTTTGTTACAAATGCTTTGGTATTTCCAAAAATGCCTTGTTTCCTTCATGTATTTGAACCAAAATATAGGTTAATGATTCGAAGATGTATGCAATCACGTCAAAGACAATTTGGAATGGTATTAGCATGTAGTAATACTTATCAAGATTTTGGAACAATGTTGGAAATAAGGTCTGCAGAATTTTTGGCTGATGGACGTTCTCTTGTTGAAACAATTGGTACTTATAAATTTAAAGTAATTGAAAAAGGTTCAAAAGATGGATATGATGTTGGAAGAGTTGAACGAGTTGATGATATTAGTCCTGAAGAAGAGGAAAGAATTGAGAGAGAAGAATTAAGACGTGCTGAAATTTATAATACTAGTAATCCATTAAATAATCCAATAAGGGAATACACCACTTCAGAATTAATTGGCATATCACGTGATTTCATAGAGACTCTACGTAATGGAAATTCTCCTTGGCTTTTACAAAGACTTAATTCAGTATATGGAGATATGCCAGATGATCCTTCAGATTTTTCTTATTGGGTCGCTTCAGTGATTCCAATAGCTGAAGGTGAAAAATATAAATTATTAGAATTAAGATCTGTTCGAGAACGATTAAAATTGATTGTAGAATGGATATCAAGTTTACGGGATCAATGGTGGTTTGCCCGGTATGGGATTACATTATGGAAAGGAAGGAATTTTAATTGGTTTTTCCGTTCCGTAAATGTAACAGAAACGATAAGGATTTTTATTATTCTAATTGAGGTCTATTGA
Protein sequence:
MSLLNTDNEEDVQMTTESYTLENEDHDNNNISDALVVLQYLTCPECQNVFKDPITFQCGNSICRGCLPNPTYQLNRKFKCPIFGCGRSHSLDCKTDVILQKLTDTSRKELAAFLPLITRQYNNNHHNNDENDFRLLNEYHYQNISDSDDDDDDNISNSIINNNIFRGGTESNNLQVDNNLDIIRIKELLMTELDCQICYSLFIDPITTPCGHSFCKPCITRSLDHNSACPICRQPLHNYNAYLHHPINKTIYSFIRALYPSLYSERRYLLDSELFNTMQDTPIFVTNALVFPKMPCFLHVFEPKYRLMIRRCMQSRQRQFGMVLACSNTYQDFGTMLEIRSAEFLADGRSLVETIGTYKFKVIEKGSKDGYDVGRVERVDDISPEEEERIEREELRRAEIYNTSNPLNNPIREYTTSELIGISRDFIETLRNGNSPWLLQRLNSVYGDMPDDPSDFSYWVASVIPIAEGEKYKLLELRSVRERLKLIVEWISSLRDQWWFARYGITLWKGRNFNWFFRSVNVTETIRIFIILIEVY
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
32806 | 536 | 5.18 | -0.451 | 47.03 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR003111,IPR027370,IPR001841,IPR017907
Pfam: PF02190,PF13923,PF13445
SMART: SM00464,SM00184
KEGG:
PRINTS: