Effector profile
PlantPEAD ID: PlantPEAD39081 Uniprot ID: H6TDC2 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 51029 Pathogen type: Nematoda
Species: Heterodera glycines Strain: SCN4 Other name: Soybean cyst nematode worm
Gene name: Expb1-2 NCBI Gene ID: HQ853293
Entry name: H6TDC2_HETGL Protein name: Expansin
DOI:
Gene/Protein information
Gene sequence:
GAAAAAGCATTTAATTTAATTTTAAAATTTAATTATTATTTCGAAAAATTTATTTAAATTTCCAAAAAAAGTTTGGGGTTTTCATTAATTTCAAAAAATGAACGCCTTCTTTTCGTTCGGCATTTTTCTTGCCATTCAATTCCATGCCCAATTTGTTTTGGCTGATGTTACGGCCTCAATAAAGCCATCGTCCACATGGAACGGTGGTGGCCAATACATTTTGAGCTTCAAGAACAATGACAACTCCAAGACAGTGTGCTCCGTCAAATTCACGTTGACGCCAGCAAGCGGAACGTCCATCTCGGCCAAGTGGGGCTTCGACGCGGTCAGTGGCGCTTCCAACCAATACACTCTGTCCAACAATGCCGACATAGCACCGGGCGCCACAAATTCAAATGGTGGCCTCAACATTCAGGGCACCAACCCTAACGGACCACCAGCAACGCCAACACTCCAACTGATTGAGGCCAAATATTACAGCAACGGTGTTTGCGGAGGATCATCATCATCGTCCGGCGGTGGTAGTTCTTCATCATCATCGTCATGCATGGGCTGTTTGGCGAGCACTGGCACATCCGGTCCCATTGACTCGTACATTGGCAAGTCGATCAGCAACAGTGTGTTCACTTTCTACGGTGGCGGCGGACGCGGGGCGTGCGGCCTCGATTCTGGCGTGCCAAAAATGTCAGCAGCTGGTTCCGGCAAACTGTTCAAGTCGGACGGGCAGTGGAAGGACGCGTGCCGTGCCGACAAACAATACATGCTGGACGACCCAATTTGCAAAGACATTTGCATTAAGATTGACTACAATGGGAAAAGCTTGACTGTGCCAATTAACAACAAATGCCCGGAATGCGATGTGAACCATGTTGATCTGACCATTGACGCTTTCAACTATTTGGAGCCACGCGGTGGCGAAGTTGGCAAAGCGACCGGCGCCACGCTCACTTACATGAAATGTCCGTCCAATATTAAAGCTTGTTGAATAATGAATGTGTTGGCATTGGCTGGCGGATGGAAGCGAGAAAAAAAAAAAA
Protein sequence:
MNAFFSFGIFLAIQFHAQFVLADVTASIKPSSTWNGGGQYILSFKNNDNSKTVCSVKFTLTPASGTSISAKWGFDAVSGASNQYTLSNNADIAPGATNSNGGLNIQGTNPNGPPATPTLQLIEAKYYSNGVCGGSSSSSGGGSSSSSSSCMGCLASTGTSGPIDSYIGKSISNSVFTFYGGGGRGACGLDSGVPKMSAAGSGKLFKSDGQWKDACRADKQYMLDDPICKDICIKIDYNGKSLTVPINNKCPECDVNHVDLTIDAFNYLEPRGGEVGKATGATLTYMKCPSNIKAC
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
11971.5 295 7.91 -0.175 39.27
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.