Effector profile
| PlantPEAD ID: PlantPEAD39225 | Uniprot ID: A0A507C971 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1806994 | Pathogen type: Fungi |
| Species: Synchytrium microbalum | Strain: JEL517 | Other name: |
| Gene name: | NCBI Gene ID: QEAO01000002 | |
| Entry name: A0A507C971_9FUNG | Protein name: Ubiquitin-like domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCAGATTTTTGTAAAGACTCTCACTGGCAAGACCATTACTTTGGAAGTCGAGTCATCCGACACCATTGACAATGTCAAGGCCAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAGCAACGATTGATTTTTGCTGGAAAGCAACTTGAGGACGGTCGTACCCTGTCAGACTACAACATCCAAAAGGAATCAACCCTCCATCTAGTCCTCCGCTTACGTGGTGGTGGTAAAAAGCGAAAGAAAAAGACCTACACCACTCCCAAAAAGATCAAACACAAGCGCAAAAAGACTAAATTGGCAATCTTGAAATACTACAAGGTTGAAGATGGAAGCTTGAAGGTTACCCGCCTTCGTCGTGAATGTCCTCAAGACACTTGTGGTGCCGGTGTCTTTATGGCGTTCCACAAGAACCGTCAATACTGTGGTCGTTGTGGTTTGACTTATACTTTCACCAAAGATCAAGTTGCAAAGTAA
Protein sequence:
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKTYTTPKKIKHKRKKTKLAILKYYKVEDGSLKVTRLRRECPQDTCGAGVFMAFHKNRQYCGRCGLTYTFTKDQVAK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17267.2 | 158 | 9.99 | -0.778 | 36.59 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR002906,IPR038582,IPR011332,IPR000626,IPR029071,IPR019954,IPR019956
Pfam: PF01599,PF00240
SMART: SM01402,SM00213
KEGG:
PRINTS: PR00348