Effector profile
| PlantPEAD ID: PlantPEAD39248 | Uniprot ID: A0A2N1NIN3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 588596 | Pathogen type: Fungi |
| Species: Rhizophagus irregularis | Strain: C2 | Other name: Arbuscular mycorrhizal fungus, Glomus intraradices |
| Gene name: | NCBI Gene ID: LLXL01000346 | |
| Entry name: A0A2N1NIN3_9GLOM | Protein name: Ubiquitin-domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAACACGAAAGGTATGCAGATTTTCGTGAAAACTTTGACGGGTAAGACTATCACCCTTGAGGTTGAGTCATCCGACACTATTGATGCTGTCAAGACCAAGATACAAGATAAAGAGGGAATCCCTCCTGATCAACAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGATAATCGTACTCTTTCTGATTATAATATCCAAAAAGAATCAACCTTACATTTAGTTCTTCGTTTGAGAGGTGGTGGTAAGAAACGTAAGAAGAAAACCTACACCACGCCAAAAAAGATCAAGCACAAGAGAAAGAAAGTCAAATTAGCAGTACTCAAATATTACAAGGTTGACGATAATGGCAAGATTTCGCGACTTCGCAGAGAATGCCCAACTGCCACATGCGGTGCTGGCATTTTTATGGCATGGCATTATGACCGTCAATATTGTGGAAAGTGTGGCTTAACTTATGTATTTAAGAAAGAAGAAACTGAATCTTAA
Protein sequence:
MNTKGMQIFVKTLTGKTITLEVESSDTIDAVKTKIQDKEGIPPDQQRLIFAGKQLEDNRTLSDYNIQKESTLHLVLRLRGGGKKRKKKTYTTPKKIKHKRKKVKLAVLKYYKVDDNGKISRLRRECPTATCGAGIFMAWHYDRQYCGKCGLTYVFKKEETES
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 32359.2 | 162 | 9.84 | -0.796 | 36.56 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR002906,IPR038582,IPR011332,IPR000626,IPR029071,IPR019954,IPR019956
Pfam: PF01599,PF00240
SMART: SM01402,SM00213
KEGG:
PRINTS: PR00348