Effector profile
PlantPEAD ID: PlantPEAD39262 | Uniprot ID: A0A2W1HMR5 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 45151 | Pathogen type: Fungi |
Species: Pyrenophora tritici-repentis | Strain: M4 | Other name: Drechslera tritici-repentis |
Gene name: | NCBI Gene ID: NQIK02000006 | |
Entry name: A0A2W1HMR5_9PLEO | Protein name: RPL40A, Ribosomal protein L40E | |
DOI: |
Gene/Protein information
Gene sequence:
ATGCAGATCTTCGTGAAGACTCTCACCGGCAAAACTATAACATTGGAGTGTGAAACCTCTGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAACTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCTACCCTCCACTTGGTCCTCCGTCTCCGTGGTGGCATCATCGAGCCCTCGCTCAAGGCGCTTGCCTCCAAGTACAACTGCGACAAGATGATCTGCCGCAAGTGCTACGCACGCCTGCCACCGAGGGCCGTCAACTGCCGCAAGAAGAAGTGCGGCCACACCAACCAGCTCCGCCCCAAGAAGAAGCTCAAATAG
Protein sequence:
MQIFVKTLTGKTITLECETSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASKYNCDKMICRKCYARLPPRAVNCRKKKCGHTNQLRPKKKLK
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
25762.4 | 128 | 9.77 | -0.653 | 34.12 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR001975,IPR038587,IPR000626,IPR029071,IPR019954,IPR019956
Pfam: PF01020,PF00240
SMART: SM01377,SM00213
KEGG:
PRINTS: PR00348