Effector profile
| PlantPEAD ID: PlantPEAD39308 | Uniprot ID: A0A3D8R1T1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1849047 | Pathogen type: Fungi |
| Species: Coleophoma cylindrospora | Strain: BP6252 | Other name: |
| Gene name: | NCBI Gene ID: PDLM01000010 | |
| Entry name: A0A3D8R1T1_9HELO | Protein name: Ubiquitin (UbiC) | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGACGTACTGATCAAGAACAGCTTCGTGAAGACCCTCACGGGCAAGACTATCACTCTTGAAGTGGAGTCATCTGATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTCCTGCGACTGAGAGGTGGCGCCAAGAAGCGCAAGAAGAAGGTCTACACCACCCCCAAGAAGATCAAGCACAAGCGCAAGAAGACCAAGTTGGCTGTGCTCAAGTACTACAAGGTTGATGGTGATGGAAAGATTGAGCGTCTTCGCCGCGAGTGCCCACAGGCCGAGTGCGGTGCTGGTGTCTTCATGGCTGCCATGCACGACCGTCAATACTGCGGAAAGTGCCACTTGACCTACATCTTCGACGAGGCCGGAAAGTAA
Protein sequence:
MDVLIKNSFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKVYTTPKKIKHKRKKTKLAVLKYYKVDGDGKIERLRRECPQAECGAGVFMAAMHDRQYCGKCHLTYIFDEAGK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17649.6 | 160 | 9.72 | -0.716 | 40.44 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR002906,IPR038582,IPR011332,IPR000626,IPR029071,IPR019954,IPR019956
Pfam: PF01599,PF00240
SMART: SM01402,SM00213
KEGG:
PRINTS: PR00348