Effector profile
PlantPEAD ID: PlantPEAD39312 | Uniprot ID: A0A8H6NA23 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 2175906 | Pathogen type: Fungi |
Species: Colletotrichum plurivorum | Strain: LFN00145 | Other name: |
Gene name: | NCBI Gene ID: WIGO01000163 | |
Entry name: A0A8H6NA23_9PEZI | Protein name: Ubiquitin-40S ribosomal protein S27a | |
DOI: |
Gene/Protein information
Gene sequence:
ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGTGCCAAGAAGCGCAAGAAGAAGGTCTACACCACCCCCAAGAAGATCAAGCACAAGCGCAAGAAGACCAAGTTGGCCGTCCTCAAGTACTACAAGGTCGACTCCGACGGCAAGATTGAGCGTCTCCGCCGCGAGTGCCCCTCCGACACCTGCGGTGCCGGTGTCTTCATGGCTGCCATGAACGACCGTCAGTACTGCGGCCGCTGCCACCTCACCTACGTCTTCGACAAGAAGGAGTAA
Protein sequence:
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKVYTTPKKIKHKRKKTKLAVLKYYKVDSDGKIERLRRECPSDTCGAGVFMAAMNDRQYCGRCHLTYVFDKKE
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
12360.4 | 154 | 9.79 | -0.786 | 35.94 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR002906,IPR038582,IPR011332,IPR000626,IPR029071,IPR019954,IPR019956
Pfam: PF01599,PF00240
SMART: SM01402,SM00213
KEGG:
PRINTS: PR00348