Effector profile
| PlantPEAD ID: PlantPEAD39344 | Uniprot ID: U9UDV1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 588596 | Pathogen type: Fungi |
| Species: Rhizophagus irregularis | Strain: strain DAOM 181602 / DAOM 197198 / MUCL 43194 | Other name: Arbuscular mycorrhizal fungus, Glomus intraradices |
| Gene name: | NCBI Gene ID: AUPC02000107 | |
| Entry name: U9UDV1_RHIID | Protein name: GrpE protein homolog | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCATTATCTTTGTCATTATTTCGTAGAGGATTATTTAATAATGTAAAAGGTTCCTTTTTATCACCTTCGATAAGAATAACAAGACCGCCACACAGAATATTATTATCAACAGCGGCTCAAGAAAATGATACTAATAACAGTAAGAATGCCCCAGCTTCTGAAAAAACTGAAAAAGTTGAAGAAATCGATGATTCTGCTGTAAAAGATAAACAAATAGCTGAGCTTAAGGATAGTTATCTTAGGTGTTTAGCAGATATGGAAAATTTACGAGAACGTACACGTAAAGAAGTAGAAAGTACAGCACAATTTGCTATACAAAAATTTGCCAAAGATTTACTTAATACAGTAGATATTTTAAATCTAGCTTTATCTTCCGTTCCTGCTGAAGTTCGCAATGATACTCAAAACAATCCTCATTTAGTTAATTTATACACTGGAGTTTCTTTAACTGAATCTGAATTATTAAATATTTTAAGGAGACATGGTGTTGAAAAAATTGAACCTTTAGGTCAAAAATTTGATCCTAATCTTCATGAAGCTATTTATCAAGTTAATGACCCTAATAAAGAACCTGGAATTGTTTGTGATGTACAAAAAGTTGGTTATTCTTTATTTGGTAGAGTTATTAGGCCTGCTCAGGTTGGAGTTAATAATAGTTAG
Protein sequence:
MSLSLSLFRRGLFNNVKGSFLSPSIRITRPPHRILLSTAAQENDTNNSKNAPASEKTEKVEEIDDSAVKDKQIAELKDSYLRCLADMENLRERTRKEVESTAQFAIQKFAKDLLNTVDILNLALSSVPAEVRNDTQNNPHLVNLYTGVSLTESELLNILRRHGVEKIEPLGQKFDPNLHEAIYQVNDPNKEPGIVCDVQKVGYSLFGRVIRPAQVGVNNS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20721.2 | 220 | 6.45 | -0.471 | 43.9 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000740,IPR013805,IPR009012
Pfam: PF01025
SMART:
KEGG:
PRINTS: PR00773