Effector profile
| PlantPEAD ID: PlantPEAD39346 | Uniprot ID: A0A0P9LBX7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
| Species: Pseudomonas cannabina | Strain: | Other name: |
| Gene name: GrpE | NCBI Gene ID: LJPX01000348 | |
| Entry name: A0A0P9LBX7_PSECA | Protein name: Protein GrpE | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAAGCCTGCTCGTCAATTGACGGCGTTGCAGGCGATGGTGCCTTGCTGACCACGACCATGGCCGGGCGCAACAGACGACCATTGAGCTGATAACCCTTCTGAAACACCTTGAGCACCGTGTTGGGCTCTACATCTGCACTTTCCTGCATGGCCATTGCCTGGTGCTGATCGGCACTGAACGGCTGACCATGCGGATCAATGGCTTCGAGCTGATAACGCTTGAGGGTGTCCTGGAACATCTTCAAGGTCAGTTCGATGCCTTCGCGCATCGGGCGAATGCTCTCGTCGTCCGGATTGGACAGATCGAGCCCTCGCTCCAGACTGTCGATGATCGGCAACAGATCACCGGCAAATTTTTCCAGCGCAAACTTGTGAGCCTTTTCAACATCCTGTTCTGCGCGGCGGCGGACATTCTGCAGATCCGCAGCCACTCGAAGGGATTGGTCCTGCGCGGCAGCCAGTTGCTCTTCGAGCACCTGCACGCGGGTTGTCAATTCTTCACCCGTACCTGCCTCGGCAGCCTGATCCTGAGCCTGCGCATCCAGATTCTGTTCGTCAGCCAT
Protein sequence:
MADEQNLDAQAQDQAAEAGTGEELTTRVQVLEEQLAAAQDQSLRVAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPIIDSLERGLDLSNPDDESIRPMREGIELTLKMFQDTLKRYQLEAIDPHGQPFSADQHQAMAMQESADVEPNTVLKVFQKGYQLNGRLLRPAMVVVSKAPSPATPSIDEQA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25797.2 | 187 | 4.57 | -0.566 | 47.77 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000740,IPR013805,IPR009012
Pfam: PF01025
SMART:
KEGG:
PRINTS: PR00773