Effector profile
| PlantPEAD ID: PlantPEAD39347 | Uniprot ID: A0A3M4WG43 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36746 | Pathogen type: Bacteria |
| Species: Pseudomonas cichorii | Strain: ICMP 6917 | Other name: |
| Gene name: GrpE | NCBI Gene ID: RBRY01000017 | |
| Entry name: A0A3M4WG43_PSECI | Protein name: Protein GrpE | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCTGACGAACAGAATCTGGATGCGCAAACCCAGGACCAGGCTGGCGAGACAGCTTCGGGTGATGATCTGGCAACTCGTGTGCAGGTGCTCGAAGAGCAATTGACTGCGGCACAGGACCAGTCCCTGCGTGTTGCTGCGGATCTGCAGAACGTACGTCGTCGTGCAGAACAGGATGTGGAAAAGGCTCACAAATTCGCTCTTGAGAAGTTCGCTGGCGATCTGCTGCCTATCGTGGACAGCCTGGAGCGTGGTCTGGACCTGTCCAATCCGGACGACGAAAGCATTCGTCCGATGCGTGAAGGTATCGAGCTGACGCTCAAGATGTTCAACGACACCCTCAAGCGTTATCAGTTGGAGGCCATCGACCCGCACGGTCAGCCATTCAATGCCGAACATCATCAGGCAATGGCGATGCAGGAAAGCGCGGATGTCGAACCAAACAGCGTTCTGAAAGTGTTCCAGAAGGGTTATCAGCTCAACGGTCGTCTGCTGCGTCCGGCCATGGTCGTGGTCAGCAAGGCACCGTCGCCTGTTTCGCCATCAATTGATGAGCAGGCTTGA
Protein sequence:
MADEQNLDAQTQDQAGETASGDDLATRVQVLEEQLTAAQDQSLRVAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPIVDSLERGLDLSNPDDESIRPMREGIELTLKMFNDTLKRYQLEAIDPHGQPFNAEHHQAMAMQESADVEPNSVLKVFQKGYQLNGRLLRPAMVVVSKAPSPVSPSIDEQA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21571.3 | 187 | 4.62 | -0.596 | 47.1 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000740,IPR013805,IPR009012
Pfam: PF01025
SMART:
KEGG:
PRINTS: PR00773