Effector profile
PlantPEAD ID: PlantPEAD39354 | Uniprot ID: P63187 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1176649 | Pathogen type: Bacteria |
Species: Agrobacterium fabrum | Strain: strain C58 / ATCC 33970 | Other name: Agrobacterium tumefaciens |
Gene name: GrpE | NCBI Gene ID: AE007869 | |
Entry name: GRPE_AGRFC | Protein name: Protein GrpE | |
DOI: |
Gene/Protein information
Gene sequence:
ATGACCGACGATACAAAAAAGCCCGGACCTGACGCGGACGTCGCGGAAGAGTTTGTCGATCCTGCCCAGGCAGGTGAAGAACAGGCCGAAACGGCAGAGCCCGATCCGGTGGAACTGCTCAAGGCTGAGAACGCCGATCTGCGCGATAAATTCCTCCGCCTTGCAGCCGAGATGGACAATCTTCGCCGCCGCACCGAGCGTGACGTCAAGGATGCCAAGGCCTATTCGCTGGCCGGTTTTGCCCGCGACATGCTTGCCGTTTCCGATAATCTTCGCCGCGCGCTGGAAGCCATTCCGGACGAACTCAAGACCAATGGCGAAGCCGGTCTCAACGGCCTGATCGAAGGCGTGGAAATGACCGAGCGCTCGATGCTGTCGACGCTGGAGCGCCACGGTGTGAAGAAGATCGATGCCGAAGGCCAGAAATTCGACCCGAATTTCCATCAGGCCATGTTCGAAGTTCCGAACACGGCGGTTCCCAACAATACCGTACTTCAGGTCATTCAGGCCGGTTTCACCATCGGTGACCGCGTTCTGCGCCCCGCGATGGTGGGTGTCGCCAAGGGCGGCCCGAAGGCTGAACCCTCCGCATCGGCCGAGCCGGGCACGTCGTCTCTTAATGAAAAGGACGCGTGA
Protein sequence:
MTDDTKKPGPDADVAEEFVDPAQAGEEQAETAEPDPVELLKAENADLRDKFLRLAAEMDNLRRRTERDVKDAKAYSLAGFARDMLAVSDNLRRALEAIPDELKTNGEAGLNGLIEGVEMTERSMLSTLERHGVKKIDAEGQKFDPNFHQAMFEVPNTAVPNNTVLQVIQAGFTIGDRVLRPAMVGVAKGGPKAEPSASAEPGTSSLNEKDA
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
22958.4 | 211 | 4.66 | -0.573 | 33.59 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR000740,IPR013805,IPR009012
Pfam: PF01025
SMART:
KEGG: atu:Atu0329
PRINTS: PR00773