Effector profile
| PlantPEAD ID: PlantPEAD39364 | Uniprot ID: A0A3D8S7J4 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1849047 | Pathogen type: Fungi |
| Species: Coleophoma cylindrospora | Strain: BP6252 | Other name: |
| Gene name: | NCBI Gene ID: PDLM01000003 | |
| Entry name: A0A3D8S7J4_9HELO | Protein name: GrpE protein homolog | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATTCAAAGAGCTATCATTAGACAATCGCGAGCGCTTGGTTCCTGTGTACGGTCTACACCCACCCGATCTTTAGCACGACCTCAATTCCGCCCTGCAAACATATCTCTGGCTCGGCCGGCAGCTGCAAGATGGTATGCCACCGAGCCAGAGGCTGAAGCCAAGAAATCTGAGGGAGACAAGGTGGCTGCTGAGGCTGAAGACCCAGTGAAGAAGGAACTGGAGGCAAAGAACAAGGAGATTATCGAGTTGAAGGATCGATACCTCCGATCTGTAGCTGAGTTCCGAAACCTGCAAGAGCGTACCAAGCGTGATATGCAGTCCGCGAAAGACTTCGCCATCCAAAAGTTCGCCAAGGACTTGGTTGAGAGCATCGACAACCTCGACCGAGCATTGTTAACGGTGCCAGAGGAGAAGCTGAAGGCTCCAGAAAAGACTGGCGATCTCCAAGACTTGGTTGCTCTTTATGATGGACTAAAGATGACGGAGGGTATTTTGATGTCGACTCTGAAGAAGCACGGCTTGGAGCGGTTCGACCCCAGCGTTGAGGGCGAGAAATTCAACCCCAACGAGCATGAAGCGACTTTCATGACGCCAATGGCTGACAAGGAGGATAACACCGTGTTCCTCACACAACAAAAGGGATTCAAGCTTAATGGCCGAGTGTTGAGAGCAGCCAAGGTCGGAGTTGTCAAGAACTCATAG
Protein sequence:
MIQRAIIRQSRALGSCVRSTPTRSLARPQFRPANISLARPAAARWYATEPEAEAKKSEGDKVAAEAEDPVKKELEAKNKEIIELKDRYLRSVAEFRNLQERTKRDMQSAKDFAIQKFAKDLVESIDNLDRALLTVPEEKLKAPEKTGDLQDLVALYDGLKMTEGILMSTLKKHGLERFDPSVEGEKFNPNEHEATFMTPMADKEDNTVFLTQQKGFKLNGRVLRAAKVGVVKNS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 26267.7 | 234 | 9.16 | -0.655 | 52.87 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000740,IPR013805,IPR009012
Pfam: PF01025
SMART:
KEGG:
PRINTS: PR00773