Effector profile
PlantPEAD ID: PlantPEAD39386 | Uniprot ID: G4TFF8 | Source: Orthologous |
Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 65672 | Pathogen type: Fungi |
Species: Serendipita indica | Strain: strain DSM 11827 | Other name: Root endophyte fungus, Piriformospora indica |
Gene name: | NCBI Gene ID: CAFZ01000071 | |
Entry name: G4TFF8_SERID | Protein name: Beta-xylanase | |
DOI: |
Gene/Protein information
Gene sequence:
ATGAAGATCTCCGTCGGATTTGCCCTTATTGCTACCCTCATTTCCAGCGCAAACGCTGTGAGCGAGTGGGGTCAGTGTGATGGAATCGGCTATGGAACCAAAGCTTGTGACTCTGGCCTGGTCTGTGTGTACATCAACGACTGGTACAGCCAGTGTCAGAAGGGGACATCCACCTCCACTCGCCAGTCGTCGTCATCGACCACCACTCGCCCAACCTCCAGTAACCCTCCGACAAGCACCGTAGCTAGCTCCACCACGAGTGGTAGCACGTCGACTGCAACCGGTCTCGGTGCCCGCATGAAGGCGAAGGGCAGGCTCTACTTTGGTACTTGCGCCGATTCTGGAACTCTCAGCAATACCCAGAACTCCAACATCATCAAGGCTCAATTCAACCAGTTGACTCCAGAGAACTCGATGAAGTGGGACACCATCGAGTCGTCTCAAAACAACTTCAATTTCAATGGAGGCAATACGCTGGTCAATTTTGCCCAGTCCATCGGGGCCTATGTCCGTGGTCATACCTTTGTGTGGCATAGTCAGCTCCCAAGCTGGGTATCTAGCATCAGCAACAGTGCAACATTGACCAGTGTCATCCAAAACCACATCACCAAGGAAGGTGGCCAATGGAAGGGCAAAATATATGCTTGGGACGTGTGCAATGAGATTCTTAACGAAGACGATCAAGATGGCTCCATGCGTAGCTCGGTGTTCTACAATGTCCTCGGAGAGAACTTCGTTTCAATTGCTTACAACCAGGCACGAAGCGTAGATCCCAACGCCAAGCTGTATATCAACGATTATAATCTTGACAGCGCAAGCTATGGGAAAACGACAGGCATGGTCTCTCGTGTCAAGAAATGGAAAGCTGCAGGGGTTCCAATCGATGGTATTGGTTCGCAAGCCCATTTGTCGTCCGGCGGCGCTGGTGGGGTACAGGCTGCTCTTGCGGCTCTCGCCGGTACCGGTGTTAGCGAAGTCGCTATTACCGAGCTAGATATTGCAGGAGGAGGAGCAAATGACTATGCCACGGCGGTGAAGGCTTGCTTGGCTGTCTCTACCTGCGTTGGTATCACCGTCTGGGGTGTCAGCGACAAGGATTCGTGGCGCTCGAGTACGACTCCTCTGCTTTACGATAGCAACTACCAGCCCAAGGCCGCTTTTACTGCTGTCATGAATGCATTGGCCTAA
Protein sequence:
MKISVGFALIATLISSANAVSEWGQCDGIGYGTKACDSGLVCVYINDWYSQCQKGTSTSTRQSSSSTTTRPTSSNPPTSTVASSTTSGSTSTATGLGARMKAKGRLYFGTCADSGTLSNTQNSNIIKAQFNQLTPENSMKWDTIESSQNNFNFNGGNTLVNFAQSIGAYVRGHTFVWHSQLPSWVSSISNSATLTSVIQNHITKEGGQWKGKIYAWDVCNEILNEDDQDGSMRSSVFYNVLGENFVSIAYNQARSVDPNAKLYINDYNLDSASYGKTTGMVSRVKKWKAAGVPIDGIGSQAHLSSGGAGGVQAALAALAGTGVSEVAITELDIAGGGANDYATAVKACLAVSTCVGITVWGVSDKDSWRSSTTPLLYDSNYQPKAAFTAVMNALA
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
27529.7 | 395 | 6.88 | -0.184 | 31.74 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR035971,IPR000254,IPR044846,IPR001000,IPR017853
Pfam: PF00734,PF00331
SMART: SM00236,SM00633
KEGG:
PRINTS: PR00134