Effector profile
PlantPEAD ID: PlantPEAD39393 | Uniprot ID: G4TFG5 | Source: Orthologous |
Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 65672 | Pathogen type: Fungi |
Species: Serendipita indica | Strain: strain DSM 11827 | Other name: Root endophyte fungus, Piriformospora indica |
Gene name: | NCBI Gene ID: CAFZ01000071 | |
Entry name: G4TFG5_SERID | Protein name: Related to endo-1,4-beta-xylanase | |
DOI: |
Gene/Protein information
Gene sequence:
ATGAAGACCTCAGTTGGACTCGTTTTCCTCGCTACACTCATTTCTCACCCCTCAGTTGTGCTCGGTGTAGCAGAGTGGGGACAGTGTGGAGGTCTCACCTACACTGGAAGCAAGACTTGTGACGCTGGACTGGTCTGCACGTACCAAAATGACTACTACAGCCAGTGTCTCAAGGGTTCTAGTACCCAGCCAGCAAGCAGCAGTAGCAGCAGCAGCCGTCCGGCTACCTCGACGACGACGAGTAGCACTGGAACGGCGACTGGTGGCCTTGGTGCACGCATGAAAGCAAAGGGCAAGAAATACTTTGGTACTTGTGCTGACGCGGGCACCCTTTCCAATACGGCAAACGCCAACATTATCAAGGCACAATTCAACCAATTGACTCCCGAGAACTCGATGAAGTGGGACTCCACTGAGAGCTCCCAAAACAATTTCAATTTCAATGGAGGCAATACTCTTGTCAACTTTGCTCAGTCTATCGGTGCTTATGTTCGTGGTCATACATTTGTGTGGCACGGTCAGCTCCCTAGCTGGGTTTCCAGCATCTCGAGCAGCAGTACCTTGACGAGCGTCATCCAAAATCACATCTCAAAGGAGGGAAGTCAGTGGAAGGGAAATATCTACGCATGGGACGTTTGCAACGAAATTCTCAATGAAGATGGATCCATGCGTAGCTCCGTCTTCTATAACGTCCTTGGAGAGAACTTTGTTTCGATTGCTTTCAACCAAGCTCGTTCCACTGACCCGAATGCAAGACTGTATATCAATGACTACAATTTGGACAGTGCCAGCTACGGCAAGGTGACCGGCATGGTCTCCCGTGTCAAAAAATGGAAAGCGGCCGGTGTGCCAATTGACGGCATTGGCTCTCAGTCCCATCTCGGCGCTGGAGGTGGAGGAGGTACACAAGGTGCCCTCACTGCTCTCGCCGGTGCTGGTGTCAGCGAAGTTGCCCTCACCGAGCTTGATATTGCCGGTGCAGCCGCAAACGACTATGTAACCGTCGTGAAAGCATGTTTGGCCGTCTCTGCCTGTGTCGGCATCACGGTCTGGGGTGTTAGTGATAAAGACTCTTGGAGATCCAGCTCGTCTCCTCTACTCTATGATACCAACTACCAACCAAAGGCAGCCTATAGTGCCGTGCTGAACGCGCTGGCCTAA
Protein sequence:
MKTSVGLVFLATLISQSSVVLGVAEWGQPYPQCDGIGYTGSKSCDSGLTCVYINDWYSQCQKGSGSQPTSTSTRPPTSTSTRPPTSTSTSNGGTATGGLGARMKAKGKKYFGTEVRIDYYNLNNAQLTNIAKAQFNQLTCENSMKWDAIEGSQNSFTFNNANQVVNFAKSYGALMRDEENDPKPSKSSILFEPSVDTLHRRLDFPTTPDIRYGEDGMIDYIPSPRKPRPLSPAKQLAEPARRRTLLEPDPVDEELKWEVQKEAESDIISGMRVMRRSIGHKDAVDSASDVPPPPSRPTNALDVAGVIDSTEFDVTEAPPAPTKTPRLKKMPDAVAALHRLAIAFLKEMDAVVFKNRLGSTYLPDLEPAPAGPSKRRGKNQTGIIYGLGSRGDYNDGLGSYIELVWSNRMATTAGRTDYRKSSNGKTTTKIELGVKILTTEAKLRNTLAHEACHAATWAISEDFKQPHGATFKKWASRVMAAFPDVEITTRHDYEIEYKFSWKCLNTSCGQVYQRHSNSINVEKHGCHCGSRLQPQFTLPAKRARKGDESPSKASRMQLSGDVDALALALKVTRLD
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
35052.8 | 575 | 8.99 | -0.582 | 43.27 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR035971,IPR000254,IPR001000,IPR017853,IPR006640
Pfam: PF00734,PF00331,PF10263
SMART: SM00236,SM00731
KEGG:
PRINTS: