Effector profile
| PlantPEAD ID: PlantPEAD39394 | Uniprot ID: G4TIH9 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 65672 | Pathogen type: Fungi |
| Species: Serendipita indica | Strain: strain DSM 11827 | Other name: Root endophyte fungus, Piriformospora indica |
| Gene name: | NCBI Gene ID: CAFZ01000106 | |
| Entry name: G4TIH9_SERID | Protein name: Beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCTACTACTCGCTCTTTTCTAGCTCTTCTCCCGCTCGTTGTCCATTTTGTTCGCGCTTGCGACGAAGCCATTCCTTTGTGGCAGCAATGTGGAGGAATCACGTATTCAGGCCCTAGCCACCCTCACTGTGTCGATGGAGCCATATGCCAGGAGTGGAATCCCTATTATTTCCAATGCATTCCTGACCCCAACGCCTCGAGCTCTTCGTCTTCGAGTGCCTCGTCCTCAAGTTCTTCGTCCGTAACTCAAAGCTCATCCACAAGCCTTCCAACCGACACCCCGACGTCGACTAGTACAAGTACTTCAAGTACAAGCACCCAAACGCCTACATTTACTCCTCCCGTCGTCCCGTTGTCGCCAACGGGCCTGGCAGCCCTCGCAAAATCGAAAGACAGGTACATTGGATCTGCATTCGACAATGGATACCTTTCCGACACTGCCTATACTAATATTGTTCTCTCCAATGTGAACCAAATCACATGCGAGAACTCGATGAAGTGGGAGAGCATTGAGGCAACGAGAGGGGTGTTCTCCAGCCCTGATGCTGATCGAATGGTTCAGCTGGCCGAAGCCAACGGAATGACGATTCGTGGTCATACTCTCGTCTGGCACTCCCAGCTCCCATCATGGGTATCTAGCGGCAATTGGACTACTTCCACTCTTACAGAAGTCATCACGTCGCACATTACCGGTGTCATGACAAAGTACAAAGGAAAGATCCACACGTGGGACGTTGTGAACGAAGTCATCGGTGATGATGCAAACATGCGTCCGTCTGTCTTCTACAACACACTCGGCGAAAGCTTTATCGATCTCGCATTCAATACGGCCAAAGCAGTCGATCCCAAGCCCATCTTGGCGATTAATGATTATAATATGGAGTATTCGCAGAAAGCCACAGCGATGTATAATCTCGTTAAGCGGCTCAAATCTCGCGGAGTTCCTGTTGAGCAGATTGGCGCTCAGGCGCACTTGGTTGTTGGTTCTCTCCCAAGCGGTATCAAGGATATCTACCAAAACTTTGCATCTCTTGGTGTTTCGGTCGCGGTCACCGAACTGGATATCCGTATGCCTACACCACCTACCGCTGCAACTCTCGCCCAACAGGCTGCTGATTATGTCACGGTTGTCAAGGCCTGTCTCGACGTCCCTCAATGTCTTGGAGTTACTTTCTGGGGTCTCACTGACAAATACTCTTGGGTTCCTGATGTATTCTCGGGTGAAGGAGCGGCTTGCTTGTACGACGAGAGCTTGCAGCCCAAGCCCGATTACACTGCCGTCCAGTCGCTTCTCTCTGCCACGCCAACGTCGACAACGACGACAGCCAGCCCTACGGATACTCAAACGACCGTGACCAGCTCTCCGACATCGACATTTACTCCACCAGTCGTCCCGTTATCCCCTACAGGTCTGGCGGCTCTCGCCAAGTCGAAGGATAGGTATATGGGATCTGCGTTCGAGAACGGATATCTTTCCGACTCGGCCTATACCAGCATTGTCCTATCAAATGTGAACCAAATCACATGCGAAAACTCAATGAAGTGGGAGAGTATCGAAGCAACGCGAGGAGTATTCTCTAGCCCCGATGCTGATCGAATGGTTCAACTGGCCGAAGCTAACGGGATGACAATTCGTGGCCATACTCTCGTCTGGCACTCTCAGCTCCCCTCATGGGTAGCCAACGGAAACTGGACCACATCGACACTGACCGAGGTTATCACGTCGCATATCACCGGAGTTATGACCAAGTACAAGGGCAAAATCCACACATGGGATGTTGTGAACGAAGTCATTGGAGACGACGCAAACATGCGTCCATCCGTCTTCTACAATACCCTCGGCGAAAGCTTCATTGACCTGGCATTCAATACGGCCAAAGCAGTTGATCCCAAGCCTATCCTGGCCATCAATGACTACAATATGGAGTATTCACAGAAGGCTACCGCCATGTATAACCTCGTCAAGCGCCTCAAATCGCGTGGTGTTCCAGTCGAGCAGATTGGCGCTCAAGCCCATCTGGTTGTCGGCTCTCTTCCAACCGGCATTAAGGATATTTACCAGAACTTCGCATCTCTCGGCGTCTCTGTTGCTGTCACCGAGTTGGATATCCGCATGCCTACTCCTCCCACCGCTGCAACTCTCGCTCAACAGGCTGTTGATTATGTCACGGTTGTCAAGGCCTGTCTTGATGTTCCTCAATGCCTTGGTGTAACTTTCTGGGGTCTCACCGACAAATACTCTTGGGTTCCTGGCGTATTCTCAGGCGAAGGTGCGGCTTGCTTGTACGACGAGAGCTTGCAGCCCAAGCCCGATTACACTGCCGTCCAGTCGCTTCTCTCTGCCACGCCAACGTCGACAACGACGACAGCCAGCCCTACGGATACTCAAACGACCGTGACCAGCTCTCCGACGTCGACATTTACTCCACCAGTCGTCCCGTTATCCCCTACAGGTCTGGCGGCTCTCGCCAAGTCGAAGGATAGGTATATGGGATCTGCGTTCGAGAACGGATATCTTTCCGACTCGGCTTATACCAACATTGTCCTATCAAATGTGAACCAAATCACATGCGAGAACTCGATGAAGTGGGAGAGTATCGAGGCAACACGCGGAGTATTCTCTAGCCCTGACGCCGATCGAATGGTTCAAGTCGCTGAAGCTAATGGCATGACAATTCGTGGGCATACTCTTGTCTGGCACTCTCAGCTCCCGTCGTGGGTTGCGAACGGCAATTGGACGACTTCAACCCTGACGGACGTTATTACATCGCATATCACCGGCGTCATGACCAAATACAAAGGGAAGATCCACACATGGGACGTTGTAAACGAAGTGATTGGTGACGACGCAAACATGCGCCCATCCGTCTTCTACAACACACTCGGCGAAAGCTTCATCGATCTCGCGTTCAACATAGCCAAAGCAGTCGATCCCAAGCCCATCTTGGCGATTAATGATTATAACATGGAGTATTCGCAGAAAGCCACAGCGATGTATAACCTCGTCAAGCGCCTCAAATCGCGTGGTGTTCCAGTCGAGCAGATTGGTGCCCAAGCCCATTTGGTGGTCGGCTCCCTTCCGAGTGGCATCAAGGATATCTACCAAAACTTTGCATCTCTTGGCGTCTCTGTTGCGGTCACCGAACTGGACATCCGCATGCCCACGCCTCCTACGGCTGCAACTCTCGCCCAACAGGCTGCTGATTATGTCACGGTTGTCAAGGCCTGTCTCGACGTTCCCCAGTGCCTCGGAGTAACTTTCTGGGGTCTCACCGACAAGTACTCTTGGGTCCCTGGTGTATTCTCGGGCGAAGGAGCAGCTTGCCTTTATGACGATAGTCTGCAACCCAAGCCTGATTATACGGCCGTTCAAGCCCTACTCTCCGCGACTCCAACGTCGACGCCAACGGACAGCTCTACCGGTAGTTCGACAACGCCTATTAGTACGAGCACCAGCGTCTCTCAAAGTAATTCAATGTCATCAAGCACTTCGAGTAGCCAG
Protein sequence:
MSTTRSFLALLPLVVHFVRACDEAIPLWQQCGGITYSGPSHPHCVDGAICQEWNPYYFQCIPDPNASSSSSSSASSSSSSSVTQSSSTSLPTDTPTSTSTSTSSTSTQTPTFTPPVVPLSPTGLAALAKSKDRYIGSAFDNGYLSDTAYTNIVLSNVNQITCENSMKWESIEATRGVFSSPDADRMVQLAEANGMTIRGHTLVWHSQLPSWVSSGNWTTSTLTEVITSHITGVMTKYKGKIHTWDVVNEVIGDDANMRPSVFYNTLGESFIDLAFNTAKAVDPKPILAINDYNMEYSQKATAMYNLVKRLKSRGVPVEQIGAQAHLVVGSLPSGIKDIYQNFASLGVSVAVTELDIRMPTPPTAATLAQQAADYVTVVKACLDVPQCLGVTFWGLTDKYSWVPDVFSGEGAACLYDESLQPKPDYTAVQSLLSATPTSTTTTASPTDTQTTVTSSPTSTFTPPVVPLSPTGLAALAKSKDRYMGSAFENGYLSDSAYTSIVLSNVNQITCENSMKWESIEATRGVFSSPDADRMVQLAEANGMTIRGHTLVWHSQLPSWVANGNWTTSTLTEVITSHITGVMTKYKGKIHTWDVVNEVIGDDANMRPSVFYNTLGESFIDLAFNTAKAVDPKPILAINDYNMEYSQKATAMYNLVKRLKSRGVPVEQIGAQAHLVVGSLPTGIKDIYQNFASLGVSVAVTELDIRMPTPPTAATLAQQAVDYVTVVKACLDVPQCLGVTFWGLTDKYSWVPGVFSGEGAACLYDESLQPKPDYTAVQSLLSATPTSTTTTASPTDTQTTVTSSPTSTFTPPVVPLSPTGLAALAKSKDRYMGSAFENGYLSDSAYTNIVLSNVNQITCENSMKWESIEATRGVFSSPDADRMVQVAEANGMTIRGHTLVWHSQLPSWVANGNWTTSTLTDVITSHITGVMTKYKGKIHTWDVVNEVIGDDANMRPSVFYNTLGESFIDLAFNIAKAVDPKPILAINDYNMEYSQKATAMYNLVKRLKSRGVPVEQIGAQAHLVVGSLPSGIKDIYQNFASLGVSVAVTELDIRMPTPPTAATLAQQAADYVTVVKACLDVPQCLGVTFWGLTDKYSWVPGVFSGEGAACLYDDSLQPKPDYTAVQALLSATPTSTPTDSSTGSSTTPISTSTSVSQSNSMSSSTSSSQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19210.4 | 1168 | 5.06 | -0.094 | 35.9 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR035971,IPR000254,IPR044846,IPR001000,IPR017853
Pfam: PF00734,PF00331
SMART: SM00236,SM00633
KEGG:
PRINTS: PR00134