Effector profile
| PlantPEAD ID: PlantPEAD39432 | Uniprot ID: A0A7Z7FMS5 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1176649 | Pathogen type: Bacteria |
| Species: Agrobacterium fabrum | Strain: PDC82 | Other name: Agrobacterium tumefaciens |
| Gene name: | NCBI Gene ID: FNEW01000001 | |
| Entry name: A0A7Z7FMS5_9HYPH | Protein name: Beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGGATCGGGCGGCGGAATTTTCTGGGTGGTGCGGCAAGCGCTGGCCTGTTGCATGCCGTGGCCGGCCCGGCCTTTGCCGCGCAGAAGAAGGCTGCGATCAAAACCGCCCCCTATGGCGCCGCCATCTACCTGCCGGATCTTACCGCCGACAGCCGTATCGGCGACGCGGTGGTGAAATATTGCTCGCGCATTACCCCCGTCACCGAAATGAAATGGGAGGTGATGCGGCCTTCGGCAGAGGTTTTCGATTTCGCCGCTGCAGATGCACTCGCCAATTTCGCGCGCCAGCACAAGCTTTCCATGCATGGCCATCCGCTGATCTGGTATGCCTCCAACGCGCCGTGGCTTGCCAGTGTCGGCGGCGCGAAGGTCGAGAAGCTGATGGAAACCCATATCGTCACCGTGATGGAGCGATATAAGGATGTGATCCACAGCTGGGATGTCGTCAATGAACCGATCCCCGACGTGCCTGGCAATGTGCGTGCACGGCGCGATGCCTGGTATTACGGCGCCGGGCCTGACGCCATCAAGAAGGCTTTCGACATCGCCCATGCGGTCGATCCGAAGGCGCAGCTCGTGCTCAACGAATATGACGTGGAATTTGCTGTCGAGAAATCGCCAGCCAAACGTGCGGCCTTCCGCAATCTCATCCTCGAGCTGCTCGAAAAGGGCGCGCCGATCAACGCCGTCGGCCTGCAGGGGCATTTGCGTGGCGGCTGGCCAATCGCCAAGGACGAGCTGGCGGCCTTCACGACGGAAATGCGCAGTTACGGTCTTGCCGTCATGGTGACGGAGCTTGACGTGATGGACCAGACGCTGCCCACACCGGAGGCCGAGCGTGATATGCTGATCACCGGCCAGGTCCGCGAGTTTCTCGAGGCCGCTTCTGCAGGCGGGCCGCTTTCTTCCATCACGACATGGGGCATTTCGGATCAATACAGCTGGATCCGCTGGGCGTATCCACGCCGGGACGGCACCGCCAACCGGCCGCTGCCGCTCGACTGGAGTTTCAACGAAAAACCCATGATGGCCGTCATCAATGAATTCCGGAACCGTGGTGCATGA
Protein sequence:
MRIGRRNFLGGAASAGLLHAVAGPAFAAQKKAAIKTAPYGAAIYLPDLTADSRIGDAVVKYCSRITPVTEMKWEVMRPSAEVFDFAAADALANFARQHKLSMHGHPLIWYASNAPWLASVGGAKVEKLMETHIVTVMERYKDVIHSWDVVNEPIPDVPGNVRARRDAWYYGAGPDAIKKAFDIAHAVDPKAQLVLNEYDVEFAVEKSPAKRAAFRNLILELLEKGAPINAVGLQGHLRGGWPIAKDELAAFTTEMRSYGLAVMVTELDVMDQTLPTPEAERDMLITGQVREFLEAASAGGPLSSITTWGISDQYSWIRWAYPRRDGTANRPLPLDWSFNEKPMMAVINEFRNRGA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 43579.8 | 355 | 6.73 | -0.145 | 31.27 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR044846,IPR001000,IPR017853,IPR006311
Pfam: PF00331
SMART: SM00633
KEGG:
PRINTS: PR00134