Effector profile
| PlantPEAD ID: PlantPEAD39433 | Uniprot ID: Q7CX80 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1176649 | Pathogen type: Bacteria |
| Species: Agrobacterium fabrum | Strain: strain C58 / ATCC 33970 | Other name: Agrobacterium tumefaciens |
| Gene name: XynA | NCBI Gene ID: AE007869 | |
| Entry name: Q7CX80_AGRFC | Protein name: Beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATGCACCACGGTTCCGGAATTCATTGATGACGGCCATCATGGGTTTTTCGTTGAAACTCCAGTCGAGCGGCAGCGGCCGGTTGGCGGTGCCGTCCCGGCGTGGATAGGCCCAGCGGATCCAGCTGTATTGATCCGAAATGCCCCATGTCGTGATGGAAGAAAGCGGCCCGCCTGCAGAAGCGGCCTCGAGAAACTCGCGGACCTGGCCGGTGATCAGCATATCACGCTCGGCCTCCGGTGTGGGCAGCGTCTGGTCCATCACGTCAAGCTCCGTCACCATGACGGCAAGACCGTAACTGCGCATTTCCGTCGTGAAGGCCGCCAGCTCGTCCTTGGCGATTGGCCAGCCGCCACGCAAATGCCCCTGCAGGCCGACGGCGTTGATCGGCGCGCCCTTTTCGAGCAGCTCGAGGATGAGATTGCGGAAGGCCGCACGTTTGGCTGGCGATTTCTCGACAGCAAATTCCACGTCATATTCGTTGAGCACGAGCTGCGCCTTCGGATCGACCGCATGGGCGATGTCGAAAGCCTTCTTGATGGCGTCAGGCCCGGCGCCGTAATACCAGGCATCGCGCCGTGCACGCACATTGCCAGGCACGTCGGGGATCGGTTCATTGACGACATCCCAGCTGTGGATCACATCCTTATATCGCTCCATCACGGTGACGATATGGGTTTCCATCAGCTTCTCGACCTTCGCGCCGCCGACACTGGCAAGCCACGGCGCGTTGGAGGCATACCAGATCAGCGGATGGCCATGCATGGAAAGCTTGTGCTGGCGCGCGAAATTGGCGAGTGCATCTGCAGCGGCGAAATCGAAAACCTCTGCCGAAGGCCGCATCACCTCCCATTTCATTTCGGTGACGGGGGTAATGCGCGAGCAATATTTCACCACCGCCTCGCCGATACGGCTGTCGGCGGTAAGATCCGGCAGGTAGATGGCGGCGCCATAGGGGGCGGTTTTGATCGCAGCCTTCTTCTGCGCGGCAAAGGCCGGCCCGGCCACGGCATGCAACAGGCCAGCGCTTGCCGCACCACCCAGAAAATTCCGCCGCCCGATCCGCAT
Protein sequence:
MRIGRRNFLGGAASAGLLHAVAGPAFAAQKKAAIKTAPYGAAIYLPDLTADSRIGEAVVKYCSRITPVTEMKWEVMRPSAEVFDFAAADALANFARQHKLSMHGHPLIWYASNAPWLASVGGAKVEKLMETHIVTVMERYKDVIHSWDVVNEPIPDVPGNVRARRDAWYYGAGPDAIKKAFDIAHAVDPKAQLVLNEYDVEFAVEKSPAKRAAFRNLILELLEKGAPINAVGLQGHLRGGWPIAKDELAAFTTEMRSYGLAVMVTELDVMDQTLPTPEAERDMLITGQVREFLEAASAGGPLSSITTWGISDQYSWIRWAYPRRDGTANRPLPLDWSFNEKPMMAVINEFRNRGA
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38231.4 | 355 | 6.73 | -0.145 | 31.06 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR044846,IPR001000,IPR017853,IPR006311
Pfam: PF00331
SMART: SM00633
KEGG: atu:Atu2371
PRINTS: PR00134