Effector profile
| PlantPEAD ID: PlantPEAD39437 | Uniprot ID: A0A370TCV2 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 2656787 | Pathogen type: Fungi |
| Species: Venustampulla echinocandica | Strain: BP 5553 | Other name: |
| Gene name: | NCBI Gene ID: NPIC01000011 | |
| Entry name: A0A370TCV2_9HELO | Protein name: Beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGTTTCACGTCGTCTGTCACAATGGCCTTGGGCCTTGGTGGAATGGTCTCCGCCAACCCGGTTCTATTTAACGCTCGTCAGGTGGCTGGTCTCAATGCTGCCATGGTCGCCAGAGGAAGGGAATACATTGGTACCTCCTTGACTATCCGCAATGATCAATCAGAGACGAATATCATCGGCAACAAGAATGAGTTCGGATCAATCACGCCCGAGAATGCCATGAAATGGGATGCCACAGAGCCAAACCAAGGCCAGTTCACCTTCGGTGGTGCAGACCAAGTGGCCAATTATGCAACTCAAAACGGCAAACACATGCGCTGCCACACTCTCGTCTGGTACAGCCAGCTTCCAGGGTGGGTGTCGAACAGCAACTTCAATAATGCCACATTGATCAACGTCATGACAAACCATATCAACCGAGTTATGGGCCAGTACAAGGGTAAATGCACTCACTGGGACGTTGTCAACGAAGCTCTCAATGAGGATGGCACTTACCGCCCTAATGTCTTCCTCAGTGTCATTGGAGAGGCGTATCTCCCAATGTCTTTCCGTCTTGCCGCTGCTGCCGACCCATCTGCCAAGCTCTACTACAACGACTACAACCTCGAGTACGCTGAAGCTAAATCCGAAGGTGCTGCCAGAATCGTCAAGCTCGTTCAGTCATATGGCGTGAGGATTGATGGCGTTGGTCTCCAAGGCCACTTGGTTGTTAGCAAGACCCCAACCCAGGACATTGCTACCCCGTCGCAGGAGATTCTAGAGAAGAGCTTGCGCATGTACACTGACTTGGGTGTCGACGTTGCCTATACCGAAGTTGATATCCGTATGAATATGCCGGCTAGTGCGCAGAATCTCCAAGAACAAGCGGAGTGCTACGGTAGACTGACCAGGGCGTGCATGGCTGTCGAGCGATGTGTTGGTATCACTCTCTGGGGTGTCTCGGACAAATACTCGTGGGTCCCGCAAACCTTCAATGGTGAAGGTGCTGCCCTCTTATGGAACGACAACTATCAGAAGAAGCCAGCCTACGATGCTATGCTGAAGGCTATCCAGGGGTAA
Protein sequence:
MRFTSSVTMALGLGGMVSANPVLFNARQVAGLNAAMVARGREYIGTSLTIRNDQSETNIIGNKNEFGSITPENAMKWDATEPNQGQFTFGGADQVANYATQNGKHMRCHTLVWYSQLPGWVSNSNFNNATLINVMTNHINRVMGQYKGKCTHWDVVNEALNEDGTYRPNVFLSVIGEAYLPMSFRLAAAADPSAKLYYNDYNLEYAEAKSEGAARIVKLVQSYGVRIDGVGLQGHLVVSKTPTQDIATPSQEILEKSLRMYTDLGVDVAYTEVDIRMNMPASAQNLQEQAECYGRLTRACMAVERCVGITLWGVSDKYSWVPQTFNGEGAALLWNDNYQKKPAYDAMLKAIQG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41959.7 | 353 | 6 | -0.286 | 34.19 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR044846,IPR001000,IPR017853
Pfam: PF00331
SMART: SM00633
KEGG:
PRINTS: PR00134