Effector profile
| PlantPEAD ID: PlantPEAD39441 | Uniprot ID: A0A3D8R8W2 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 565419 | Pathogen type: Fungi |
| Species: Coleophoma crateriformis | Strain: BP5796 | Other name: |
| Gene name: | NCBI Gene ID: PDLN01000012 | |
| Entry name: A0A3D8R8W2_9HELO | Protein name: Beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATTCGCATTCACAACATCGCAACCGTCGCTGCTCTTTTCAACACCTTCGATACAGCTCTTGCTCAGGGCTCTGCTTATGCCCAATGTGGTGGAATTGGATTCACTGGAGCGACAACGTGTGTAAGCGGGTATATCTGCAAATATTCCAAAGACTACTCCCAGTGCCTACCAGGCACCGCATCCAGTTCGGCATCTATAACCATACCCACAACCCTCACAACTGTCACATCCACCACTGCAACTGCAACTGCAAGCGGAGGCTCTAGCACAAGCATCAACACCAAATTCGTTGCCCATGGCAAGAAATATTTCGGTGTGGCAACGGATCAAGGTCGGCTTACTACCGGAAGCAATGAAGCCATAATCAACGCCGACTTTGGAGCTGTAACGCCGGAAAATAGTATGAAGTGGGATGCTACCGAAGCTTCACAGGGTGTCTTCACATTCACGCAGGCCGACTACTTGGTGAACTACGCTACAACAAATGGCAAATTGATCCGTGGACACACCCTGTGCTGGTACTCTCAGCTTCCATCCTGGGTCAGCGCAATTACAGATGCAGCAACACTCACGTCCGTTCTTGAGAACCATATTACAATTCTGATGACCCGATACAAGGGCAAGATCTATGCCTGGGATGTCGTCAATGAAGTCTTTAATGAAGATGGGACCATGCGTAGTGACGTCTTCTACAACGTCCTCGGCGAGGACTTCATATCCATTGCGTTCAAGACCGCAAGAGCTGCAGACCCAAATGCGAAGTTGTATATTAATGATTACAACCTGGACTCCGCAAGCTATGCAAAGGTCACCAACGGCATGGTTGCACACGTGAAGAAGTGGCTTGCCGCCGGCATTCCCATTGATGGCATTGGATCACAATCTCATCTTAGCGCGGGCCAGTCTTCTGGTACTGCAGGTGCACTGGCAGCTCTAGCCGCCACCGGAGTATCTGAGATTGCCATCACGGAGCTCGACATCGTTGGAGCAGCTGCATCGGACTATGTTGCTGTCACTAATGCATGTCTCGGGGTCGCAAAATGTATTGGTATCACTGTCTGGGGGGTCCGTGATCCAGATTCATGGAGGGCGAGCTCGACGCCGTTGCTGTTCGATGCCAATTATTCCCCTAAGCCAGCTTACACTGCCATTCTGAACGCTCTATAA
Protein sequence:
MIRIHNIATVAALFNTFDTALAQGSAYAQCGGIGFTGATTCVSGYICKYSKDYSQCLPGTASSSASITIPTTLTTVTSTTATATASGGSSTSINTKFVAHGKKYFGVATDQGRLTTGSNEAIINADFGAVTPENSMKWDATEASQGVFTFTQADYLVNYATTNGKLIRGHTLCWYSQLPSWVSAITDAATLTSVLENHITILMTRYKGKIYAWDVVNEVFNEDGTMRSDVFYNVLGEDFISIAFKTARAADPNAKLYINDYNLDSASYAKVTNGMVAHVKKWLAAGIPIDGIGSQSHLSAGQSSGTAGALAALAATGVSEIAITELDIVGAAASDYVAVTNACLGVAKCIGITVWGVRDPDSWRASSTPLLFDANYSPKPAYTAILNAL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40703.7 | 389 | 5.66 | 0.131 | 23.36 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR035971,IPR000254,IPR044846,IPR001000,IPR017853
Pfam: PF00734,PF00331
SMART: SM00236,SM00633
KEGG:
PRINTS: PR00134