Effector profile
| PlantPEAD ID: PlantPEAD39443 | Uniprot ID: A0A3D8SSQ5 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1849047 | Pathogen type: Fungi |
| Species: Coleophoma cylindrospora | Strain: BP6252 | Other name: |
| Gene name: | NCBI Gene ID: PDLM01000001 | |
| Entry name: A0A3D8SSQ5_9HELO | Protein name: Beta-xylanase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATTCGCATTCACAACATTGCAACCGTCGTTGCTCTTTTCAGCACCTTCGATGCTGCTCTTGCTCAAGGCTCTGCTTATGCCCAATGTGGTGGAATTGGATTCACTGGTGCGACAACGTGTGTGAGCGGGTATACCTGCAAATATTCCAAAGACTACTCCCAGTGCCTACCAGGCACCGCATCCAGCTCGGCATCCACAACCATACCCACAACCCTCACAACTGTCGCCTCCACCTCAGCAACTGCAACAGCAAGCGCAGGCTCTAGCACAAGCATCAACAGCAAATTCGTCGCCCATGGCAAGAAATATTTCGGTGTGGCAACGGATCAAGGCCGTCTTACTACCGGAAGCAATGAAGCCATAATCAACGCCGACTTTGGAGCTGTGACGCCGGAAAATAGTATGAAGTGGGATGCTACCGAAGCTTCGCAGGGTGTTTTCACATTCACGCAGGCCGACTACTTGGTGAACTACGCTACAACAAATGGCAAACTCATCCGTGGACACACCCTGTGCTGGTACTCTCAGCTTCCAGCCTGGGTCAGCGCAATTACAGATGCGGCAACGCTCACATCCGTTCTTGAGAACCATATTACAACCCTAATGACCCGATACAAGGGCAAGATCTATGCCTGGGATGTCGTCAATGAAGTCTTCAATGAAGATGGGACTATGCGTAGTGATGTCTTCTACAACGTCCTCGGCGAGAATTTCATTTCCATTGCGTTCAAGGCCGCAAGAGCTGCAGACCCAAATGCGAAGTTGTATATTAATGATTACAACCTGGACTCCGCAAGCTATGCAAAGGTGACCAACGGCATGGTTGCCCACGTGAAGAAGTGGCTTGCCGCCGGCATCCCCATTGATGGCATTGGATCACAATCCCATCTGAGCGCGGGCCAGTCTTCCGGTACTGCAGGTGCACTGGCAGCTCTAGCCGCAACTGGAGTATCTGAGATTGCCATCACGGAGCTCGACATTGTTGGGGCAGCCGCATCGGACTATGTTGCTGTCACCAATGCATGTCTCGGGGTCGCAAAATGTATCGGTATCACCGTCTGGGGAGTCCGTGATCCAGATTCATGGAGGGCGAGCTCGACGCCATTGCTGTTCGATGCCAATTATTCCCCGAAGCCAGCTTACACTGCTATTCTGAATGCTCTATAA
Protein sequence:
MIRIHNIATVVALFSTFDAALAQGSAYAQCGGIGFTGATTCVSGYTCKYSKDYSQCLPGTASSSASTTIPTTLTTVASTSATATASAGSSTSINSKFVAHGKKYFGVATDQGRLTTGSNEAIINADFGAVTPENSMKWDATEASQGVFTFTQADYLVNYATTNGKLIRGHTLCWYSQLPAWVSAITDAATLTSVLENHITTLMTRYKGKIYAWDVVNEVFNEDGTMRSDVFYNVLGENFISIAFKAARAADPNAKLYINDYNLDSASYAKVTNGMVAHVKKWLAAGIPIDGIGSQSHLSAGQSSGTAGALAALAATGVSEIAITELDIVGAAASDYVAVTNACLGVAKCIGITVWGVRDPDSWRASSTPLLFDANYSPKPAYTAILNAL
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 37299.4 | 389 | 5.85 | 0.135 | 22.69 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR035971,IPR000254,IPR044846,IPR001000,IPR017853
Pfam: PF00734,PF00331
SMART: SM00236,SM00633
KEGG:
PRINTS: PR00134