Effector profile
PlantPEAD ID: PlantPEAD39817 Uniprot ID: A0A097F836 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 36090 Pathogen type: Nematoda
Species: Globodera pallida Strain: FG_A17 Other name: Potato cyst nematode
Gene name: HYP-3 NCBI Gene ID: KM206266
Entry name: A0A097F836_GLOPA Protein name: HYP effector
DOI:
Gene/Protein information
Gene sequence:
ATGGTCGGCAACAATTTGAAGCTGTACCTTCTTCTGGCGGGCTTCTGCATGTTCATCTACGGCACTGAAGCCTGGGGATGCAAGCCGGGACCAAAAGGGCGGTCCGGCCCTCCGGGCGTTGCGGGGAAAAAGGGACCGCCCGGCAAATGCGATAAACCGCCGTCCAAATATGAGCCAACGACGCCGCCTCCCAAGTACGAGGAGAACCGCAAAAGATCAGCGCCCGAGGCGTTTTCGGATGCGGTGGGCGTTGTCAGAGTTGCCCGCGGGGAATATGAAAACAAGTGTCCAGCCGGGCCGCCCGGCGATGACGGCCCTCCCGGACCGCCGGGCCCCCCCGGAGAGCCGGCAACGTGTCCTCCTCCGAAGAAGTACGGTAACGATGAGAAGGAAGAGGAGAAAAAATACGGTAAAGATGAGAAGGAAGAGGAGAAGAAATACGGTAACGATGGAAAGGAAAAGGAAAAGAAGTACGGTAGCGATGAGAATGAAAAGGAGGAAAGTGGTAAAGGATCCGGAGGTCATGAACACGGAGGGGACAGCAAGGGAGAAAAGTATGAGCATCGTCTCCGTGCTGTGCGCAGTTGCGAAGATGAAGTTGGACCTCCCGGGCCTCCGGGGGCGGACGGGCCTCCAGGCCCGGATGGACCGCCGGGGGCTTGCGAATGCAAATATTAA
Protein sequence:
MVGNNLKLYLLLAGFCMFIYGTEAWGCKPGPKGRSGPPGVAGKKGPPGKCDKPPSKYEPTTPPPKYEENRKRSAPEAFSDAVGVVRVARGEYENKCPAGPPGDDGPPGPPGPPGEPATCPPPKKYGNDEKEEEKKYGKDEKEEEKKYGNDGKEKEKKYGSDENEKEESGKGSGGHEHGGDSKGEKYEHRLRAVRSCEDEVGPPGPPGADGPPGPDGPPGACECKY
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
14252.3 225 5.83 -1.355 45
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.