Effector profile
| PlantPEAD ID: PlantPEAD39828 | Uniprot ID: A0A2P4RL85 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 329 | Pathogen type: Bacteria |
| Species: Ralstonia pickettii | Strain: ICMP-8657 | Other name: Burkholderia pickettii |
| Gene name: | NCBI Gene ID: NREQ02000002 | |
| Entry name: A0A2P4RL85_RALPI | Protein name: Type VI secretion system tube protein Hcp | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAGGCTTCCTTATTGCCCTTGATGTCGTAGCCTGCCGTGATCGCCCCACCGCTACCGCCTTGGGCGTTCTGCACCATGTACTCCTGCTTGACCTTGGAGAACGACAGCGCCACCTTCTCGCGCACACGTGCCTCGTCGGTCGCGGCACCACGCGGTGCCACCCTGGTCACGATCACATCGCTCATCGTGAGCTTCAGGTACTCCAGCGGGTTGCCGCCGGCCTTTCGCACTACCAGCGTGGCTTGGTCGATGTGCTTACCAGTCAGGCAGTACTTCATCAGGTTGGGCGATGCACGGTCAACGTAGTGCTCGAACGACAGGTCCGACACGGTGGCCTTGCCGGCACCGCCGCCGCTGCCGGCGTGCATGTTCGACTGTTGCTCGATGTTCCAGTCCCACACCAGCACTTCGATTTCGTTCTTGTGCGACGAGTCTTGAGATTCGCCGTCGATGCCATTGATCTTCAGGAAGATGTCCTGTGCCAT
Protein sequence:
MAQDIFLKINGIDGESQDSSHKNEIEVLVWDWNIEQQSNMHAGSGGGAGKATVSDLSFEHYVDRASPNLMKYCLTGKHIDQATLVVRKAGGNPLEYLKLTMSDVIVTRVAPRGAATDEARVREKVALSFSKVKQEYMVQNAQGGSGGAITAGYDIKGNKEA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19707.1 | 161 | 6.08 | -0.402 | 48.49 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: