Effector profile
PlantPEAD ID: PlantPEAD39829 Uniprot ID: A0A0P9QH49 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: ICMP2823 Other name:
Gene name: NCBI Gene ID: LJPX01000419
Entry name: A0A0P9QH49_PSECA Protein name: Secreted protein Hcp
DOI:
Gene/Protein information
Gene sequence:
TCAACCGCGGGCTGATTTGCCCCACTTGTCGGAACCTTCTGTGTTAGAAGTTACATGAGTTTCTACGATGTCACGATAACTGAAATGTACATCTTGCAAATGTTCAAGGTGTAATCTTTCAGCGGCTTGGCGAGTAGGGGTGTGCTTATTAATGGCAACAATCCTAGCGTCTTTCAGGGTGGTCGTATAATAATGTTGTTTGATACCGTTAGCCATGCGATAAAAGGCTATTTTCACTTCTTCTAACTCTTCTTCCTGGACGAAAGCCTGTAATAACAATGGTGATGCCTTGTCAAAAGATTTTGTGATGCGCACGGGGTTGTGCACGCGTAGACCTGTGCTGTTGCCTGAATGAGGATCGTGAGGAACCGTCATTTCGTGATGGTAATCATGAAGGGTCGATTCGTCTCGATGATCTTCCTGATAATCACCCCCCACAGATTCTTTGGCAGAGGCATCCTTGGTTATAAGGCCTTGAATTTTTCCTTTGACTGTCAGGTAAGCAAGTATTGACAT
Protein sequence:
MSILAYLTVKGKIQGLITKDASAKESVGGDYQEDHRDESTLHDYHHEMTVPHDPHSGNSTGLRVHNPVRITKSFDKASPLLLQAFVQEEELEEVKIAFYRMANGIKQHYYTTTLKDARIVAINKHTPTRQAAERLHLEHLQDVHFSYRDIVETHVTSNTEGSDKWGKSARG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
19169.6 171 6.49 -0.712 35.31
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.