Effector profile
PlantPEAD ID: PlantPEAD39830 Uniprot ID: I0BW21 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: PSa1-3 Other name:
Gene name: Hcp NCBI Gene ID: JQ517284
Entry name: I0BW21_PSECA Protein name: Hcp
DOI:
Gene/Protein information
Gene sequence:
TCAAGCTATCGCAGGCTCTCTCCAATCATCAGAACCAGTGGTGGTCGCTTTGACGTGCTCCCACGTGATTTTGCGATAGCTGAAGTACACATCCTGTAAGTGTGTGAAATGTGCGCTGTCCGGATCTTGGCAGTTAGGCATGTAGTCCTCAATTTTCACAATGACGGCGTCGTCCAGCGTGGTGGTGTAATAGTGTTCCTGCTTGCCTTGGTCAGACGTGCGATACCACTTGATCTGGACTTCGCTCAAGGTTGCGCCAGAGCAAAGGGCTTCTAAAAGTAAAGGTGATGTCCTGTCGAAAATCTTTGTGATACAGACAGGCTTGTGAACACGCTGGCCGGTAGGTTGGCCAGATTGAGGGTCGCACGGAATATCAATTGTGTGCTTGAACGCCTGGACTATTGCTTCGTCCTCATGGCCCGTCTGGTAGCTGTTTCCTACCGATTCCGGTGTAAAAGCCTTAGCAGTAAGAATTTTTTGATTTGCGTCAACTATAGAGATGTAAGCAGGTGTTGGCATGGGTGTCAT
Protein sequence:
MTPMPTPAYISIVDANQKILTAKAFTPESVGNSYQTGHEDEAIVQAFKHTIDIPCDPQSGQPTGQRVHKPVCITKIFDRTSPLLLEALCSGATLSEVQIKWYRTSDQGKQEHYYTTTLDDAVIVKIEDYMPNCQDPDSAHFTHLQDVYFSYRKITWEHVKATTTGSDDWREPAIA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
19258 175 5.24 -0.495 33.19
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.