Effector profile
PlantPEAD ID: PlantPEAD39832 Uniprot ID: A0A3M4VNI2 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 36746 Pathogen type: Bacteria
Species: Pseudomonas cichorii Strain: ICMP 6917 Other name:
Gene name: NCBI Gene ID: RBRY01000135
Entry name: A0A3M4VNI2_PSECI Protein name: Secreted protein Hcp
DOI:
Gene/Protein information
Gene sequence:
TTAGGCTCTTATTGGAAAGCGCAAGTCGTCAGACCCTGAGCTCTTGGCCATCAGATGGGTCCAGGTTATTTTGCTGTAGGCGATATGAACGTCTTGCAAGTGGCTGGAATGCGCGTTGGCTGGATCCTGGCTGCTAAGCATGTAGTCTTTGATTTCCACAATGACGGCGTCTTCCAGGGAGGTGGTGTAATAGTGCTCCAGCACGCCATCCGCAATGCGATACCAGTGTATTTCGACCAGAGGCAGGCGTTCGTTGGAGGCCAGTGCTGCCTGCAGCATCGGTGAAGCTCTGTCGAATATCTTGGTAATGCAGAGGGGTTTGTGAATGCGTGTGGTGGCAGGCTGGCTTGACTGTAAATCACAAGGAACGGTGATCACATGGCTGACAGCCTGGATCATGAACTGATCTTCATGCTCCTTCTTATAAGTGTTTCCAACCGATTCAAAAGTTAAGGCCTTTTCAGTGATCAGGCCTTGTCTGGAACCTTTTATAGACATGTAAACAGGTGTGGCCAT
Protein sequence:
MATPVYMSIKGSRQGLITEKALTFESVGNTYKKEHEDQFMIQAVSHVITVPCDLQSSQPATTRIHKPLCITKIFDRASPMLQAALASNERLPLVEIHWYRIADGVLEHYYTTSLEDAVIVEIKDYMLSSQDPANAHSSHLQDVHIAYSKITWTHLMAKSSGSDDLRFPIRA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
18799 171 6.29 -0.206 55.84
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.