Effector profile
| PlantPEAD ID: PlantPEAD39838 | Uniprot ID: S9NZM7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 43 | Pathogen type: Bacteria |
| Species: Cystobacter fuscus | Strain: strain ATCC 25194 / DSM 2262 / NBRC 100088 / M29 | Other name: |
| Gene name: | NCBI Gene ID: ANAH02000071 | |
| Entry name: S9NZM7_CYSF2 | Protein name: Type VI secretion system tube protein Hcp | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTAGCGCTGATCCGACCAGGTGTCCTCGTGCTGCACGCCACCGTTCGTGTACGTCCACGAGATGGTGTGGAACACGAACGACAGCTCCTCGAGGGGCGGCTCGAAGGAGGTGGCGGGGACGATGGTGCTGGGCACGTACTGCTTGATGTGGTTGATGCGGCCCTGCTTGATGACGACGGTGTAGAACTGCTCCGTCGTGCCGTCACCCGTGGGGTTGGGGCGGAAGAACTTCATCGTCCCCTCGATGACGGCGTTCTCCACCAGCGCCTTCATGAGCAGGGGCGAGCTCTTGTCGATGCGCTTGCGGATGAGCAGCGGCGAGTACTGGCGCCGGCCGGACGCGATGCCCGAGCCGCGCTCACGCGCCGTGATGACCTCCTGCTCGTAATAGACGCACTCGATGGAGCCGTCGCGCCCGAGGCTCTTCTGGGTGCTCTCTCCCTTGATGTCCGCGCCATTGGCCTTCAGAAAGAGGTGTACTGTCTCTGCCAT
Protein sequence:
MAETVHLFLKANGADIKGESTQKSLGRDGSIECVYYEQEVITARERGSGIASGRRQYSPLLIRKRIDKSSPLLMKALVENAVIEGTMKFFRPNPTGDGTTEQFYTVVIKQGRINHIKQYVPSTIVPATSFEPPLEELSFVFHTISWTYTNGGVQHEDTWSDQR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25970.2 | 163 | 6.91 | -0.444 | 40.32 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: