Effector profile
PlantPEAD ID: PlantPEAD39859 Uniprot ID: A0A3M3KD88 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: ICMP 2821 Other name:
Gene name: NCBI Gene ID: RBOW01000843
Entry name: A0A3M3KD88_PSECA Protein name: Type III helper protein HopAJ1
DOI:
Gene/Protein information
Gene sequence:
TCAAGCACTGCGTTTTAAATAAGAGGCAGTGGAGGCCAGCGCATCGGCACGGGAACTCCAAACGTCGCGCCGATTGTCGTGGTTAAAATCAACTGCATAGTCAAGATAGGTCGTCGGGATAAATTGCGTCTGCCCCATCGCGCCAGCCCACGAGCCAATCAATTGCGCGCGAGCAATGTCTTTGTTTTGCAGGATATGAAGGGCGGCCATCAACTGTGTAGCCCCGTAATTCATCCGCCGGCCCTTGTAAGCAAGCGTGGCCAAGGAACGAATCACATCGCGACTACCAATATCCTTCCCGTAGCCGCTCTCAATACACCAGATGGCCGCGATAATCTTCGCATTCACACCGTAATGACGCTCTACCTCGTTCAAAACTGGCTCTTTTTGCAGAAGCTCCTGCCCTTGCTGGGTATTCTTCGGAGTCAGACGCTCAGACAAGTAATCCCAGATGGCCGTCGTGAACTCTGGTTGCGCCGTGTCCAACTGGTGCACAGTTGGGTCAAGCGTGATGTTTTGGAAGGCAAGATCGAGTGTGGCTGTGTCGATGCCCTTAGTAGTTGCATTGCTGCGGAAAGTAGCCAGCCATTGCTGAAAATCCGCCTCTGACGTGCTCTCGTTCTGCACGCCGGGAGTCATGTCTGTGGCGAAGCAAGCTGGCGCGGCTGATGCACATGCAAGCATAATGACTACCAGCGATGGAGTTATAACCCTGGAACGCAT
Protein sequence:
MRSRVITPSLVVIMLACASAAPACFATDMTPGVQNESTSEADFQQWLATFRSNATTKGIDTATLDLAFQNITLDPTVHQLDTAQPEFTTAIWDYLSERLTPKNTQQGQELLQKEPVLNEVERHYGVNAKIIAAIWCIESGYGKDIGSRDVIRSLATLAYKGRRMNYGATQLMAALHILQNKDIARAQLIGSWAGAMGQTQFIPTTYLDYAVDFNHDNRRDVWSSRADALASTASYLKRSA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
40097.5 240 6.08 -0.214 46.35
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.